PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0042s0136.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 527aa MW: 58005 Da PI: 4.6166

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0042s0136.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.1	1.3e-15	36	83	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +l+d+vk+ G g+W+++ ++ g+ R++k+c++rw ++l Kaladp0042s0136.1.p 36 KGPWTSAEDAILIDYVKKRGEGNWNAVQKHSGLFRCGKSCRLRWANHL 83 79******************************************9986 PP
2	Myb_DNA-binding	48.2	2.5e-15	89	132	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+ T+eE+ l++++++++G++ W++ a++++ gRt++++k++w++ Kaladp0042s0136.1.p 89 KGSITAEEERLIIELHAKMGNK-WARMAAHLP-GRTDNEIKNYWNT 132 6788****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 527 aa Download sequence
MSIDSEDGPL SNEELESQLV DDESSRGIMN GVVLKKGPWT SAEDAILIDY VKKRGEGNWN 60 AVQKHSGLFR CGKSCRLRWA NHLRPNLKKG SITAEEERLI IELHAKMGNK WARMAAHLPG 120 RTDNEIKNYW NTRIKRRQRA GLPLYPPEVC LQALLENQSE GPSRTNSRGN RHTNTNSYDI 180 PDVVFHSMPA IHGALSYFPE LPGMTSDSGL LEAVGSTQQS NFVLSQQPKS FCGFRSHGYG 240 FDVIVKNELP TFEPVQDDPK FNQSPGLFFP YDRDPNDNHW SLGETQDSHS FVNCNFSTPK 300 PSCEAVKSEL PSFQYPDTDS SNWDTFYSAS PLPDLLDSHI QAGTPNEAVH SECSSPRNSG 360 LLDALLYEAR AISGVKNQLS NKSSNSSAVT PSEFAGETVP TFCETEIGNN SEPITPLGST 420 TSIYCGSVFT AAHGTFFDSH PLQETYFGCR LKPEPVDDVS NPVEVNSPAP ARLDSLEPGL 480 PFYSDWVDDQ ESGFNVNETT MEEGVAEALG NDFQYMGSTL PGQGWG*

Sequence ? help Back to Top

Protein Sequence Length: 527 aa Download sequence

MSIDSEDGPL SNEELESQLV DDESSRGIMN GVVLKKGPWT SAEDAILIDY VKKRGEGNWN  60
AVQKHSGLFR CGKSCRLRWA NHLRPNLKKG SITAEEERLI IELHAKMGNK WARMAAHLPG  120
RTDNEIKNYW NTRIKRRQRA GLPLYPPEVC LQALLENQSE GPSRTNSRGN RHTNTNSYDI  180
PDVVFHSMPA IHGALSYFPE LPGMTSDSGL LEAVGSTQQS NFVLSQQPKS FCGFRSHGYG  240
FDVIVKNELP TFEPVQDDPK FNQSPGLFFP YDRDPNDNHW SLGETQDSHS FVNCNFSTPK  300
PSCEAVKSEL PSFQYPDTDS SNWDTFYSAS PLPDLLDSHI QAGTPNEAVH SECSSPRNSG  360
LLDALLYEAR AISGVKNQLS NKSSNSSAVT PSEFAGETVP TFCETEIGNN SEPITPLGST  420
TSIYCGSVFT AAHGTFFDSH PLQETYFGCR LKPEPVDDVS NPVEVNSPAP ARLDSLEPGL  480
PFYSDWVDDQ ESGFNVNETT MEEGVAEALG NDFQYMGSTL PGQGWG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11440.1	8e-91	MYB family protein