PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0042s0135.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 647aa MW: 73963.3 Da PI: 9.2723 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.8 | 1.2e-08 | 468 | 508 | 2 | 39 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkq 39 ++W +eE ell ++v+++++g +W+ I++++g+gR+ + Kaladp0042s0135.2.p 468 KPWGKEEIELLRKGVQKYPKGtsrRWEVISEYIGTGRSVDE 508 69**********************************99765 PP | |||||||
2 | Myb_DNA-binding | 28.4 | 3.8e-09 | 589 | 632 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 W++ ++ l++a k ++++ +W+++a ++ g+t +qck ++ Kaladp0042s0135.2.p 589 QWSAVQEKALIQALKTFPKEanqRWERVATAVP-GKTVNQCKKKF 632 7********************************.********997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 647 aa Download sequence |
MSKMVPAKNT FRLITYSKEI VNGEPIFVSS NCLPKKALKY EPAGHAFHEA AMRLGGFFEE 60 EQDGKVEEQN TSSDKEQYMP SSGSYSTKSK KKSGSESKEQ DHYALLNLSH LRYLATEEQI 120 RKSYRETALK YHPDKQAALL LSEETEAGKQ AKKEEIEAHF KSIQEAYEVL IDPIKRRIYD 180 STDEFDDEIP TDCAPQDFFK VFGPAFMRNG RWSVAQPVPS LGDDNAPLKE VDDFYNFWYG 240 FKSWREFPHA DEYDLEQAES RDHKRWMERQ NAKLSEKARK EEYVRIRSLV DNAYRRDPRI 300 VRRKEEEKAE KQRKKQAKYL AKQLEEEKAA KEAEEEKRRK EEEDKRAAEA NALQKKAKEK 360 EKKLLRKERS RLRTLSAAVV SQSHHNVAQD DIEGLCMSLG MDDLKNLCDK LEGKETKDQA 420 EILRIILGRK ATMEVAAHDN KKPLYQNGSA TQNGTVHLGG YEKKEREKPW GKEEIELLRK 480 GVQKYPKGTS RRWEVISEYI GTGRSVDEIL KATKTVLLQK PDSNKAFDSF LEKRKPSPSI 540 QSPLSTRDDI VGATKAPSAA VDTSNTGLTE QKAEKETSNG PPSSSDPDQW SAVQEKALIQ 600 ALKTFPKEAN QRWERVATAV PGKTVNQCKK KFALMKESFR SKKSGE* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 337 | 360 | KRRKEEEDKRAAEANALQKKAKEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11450.1 | 0.0 | MYB family protein |