PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0042s0135.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 647aa MW: 73963.3 Da PI: 9.2723

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0042s0135.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.8	1.2e-08	468	508	2	39
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkq 39 ++W +eE ell ++v+++++g +W+ I++++g+gR+ + Kaladp0042s0135.1.p 468 KPWGKEEIELLRKGVQKYPKGtsrRWEVISEYIGTGRSVDE 508 69**********************************99765 PP
2	Myb_DNA-binding	28.4	3.8e-09	589	632	3	44
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 W++ ++ l++a k ++++ +W+++a ++ g+t +qck ++ Kaladp0042s0135.1.p 589 QWSAVQEKALIQALKTFPKEanqRWERVATAVP-GKTVNQCKKKF 632 7******************************.******997 PP

Sequence ? help Back to Top
Protein Sequence Length: 647 aa Download sequence
MSKMVPAKNT FRLITYSKEI VNGEPIFVSS NCLPKKALKY EPAGHAFHEA AMRLGGFFEE 60 EQDGKVEEQN TSSDKEQYMP SSGSYSTKSK KKSGSESKEQ DHYALLNLSH LRYLATEEQI 120 RKSYRETALK YHPDKQAALL LSEETEAGKQ AKKEEIEAHF KSIQEAYEVL IDPIKRRIYD 180 STDEFDDEIP TDCAPQDFFK VFGPAFMRNG RWSVAQPVPS LGDDNAPLKE VDDFYNFWYG 240 FKSWREFPHA DEYDLEQAES RDHKRWMERQ NAKLSEKARK EEYVRIRSLV DNAYRRDPRI 300 VRRKEEEKAE KQRKKQAKYL AKQLEEEKAA KEAEEEKRRK EEEDKRAAEA NALQKKAKEK 360 EKKLLRKERS RLRTLSAAVV SQSHHNVAQD DIEGLCMSLG MDDLKNLCDK LEGKETKDQA 420 EILRIILGRK ATMEVAAHDN KKPLYQNGSA TQNGTVHLGG YEKKEREKPW GKEEIELLRK 480 GVQKYPKGTS RRWEVISEYI GTGRSVDEIL KATKTVLLQK PDSNKAFDSF LEKRKPSPSI 540 QSPLSTRDDI VGATKAPSAA VDTSNTGLTE QKAEKETSNG PPSSSDPDQW SAVQEKALIQ 600 ALKTFPKEAN QRWERVATAV PGKTVNQCKK KFALMKESFR SKKSGE*

Sequence ? help Back to Top

Protein Sequence Length: 647 aa Download sequence

MSKMVPAKNT FRLITYSKEI VNGEPIFVSS NCLPKKALKY EPAGHAFHEA AMRLGGFFEE  60
EQDGKVEEQN TSSDKEQYMP SSGSYSTKSK KKSGSESKEQ DHYALLNLSH LRYLATEEQI  120
RKSYRETALK YHPDKQAALL LSEETEAGKQ AKKEEIEAHF KSIQEAYEVL IDPIKRRIYD  180
STDEFDDEIP TDCAPQDFFK VFGPAFMRNG RWSVAQPVPS LGDDNAPLKE VDDFYNFWYG  240
FKSWREFPHA DEYDLEQAES RDHKRWMERQ NAKLSEKARK EEYVRIRSLV DNAYRRDPRI  300
VRRKEEEKAE KQRKKQAKYL AKQLEEEKAA KEAEEEKRRK EEEDKRAAEA NALQKKAKEK  360
EKKLLRKERS RLRTLSAAVV SQSHHNVAQD DIEGLCMSLG MDDLKNLCDK LEGKETKDQA  420
EILRIILGRK ATMEVAAHDN KKPLYQNGSA TQNGTVHLGG YEKKEREKPW GKEEIELLRK  480
GVQKYPKGTS RRWEVISEYI GTGRSVDEIL KATKTVLLQK PDSNKAFDSF LEKRKPSPSI  540
QSPLSTRDDI VGATKAPSAA VDTSNTGLTE QKAEKETSNG PPSSSDPDQW SAVQEKALIQ  600
ALKTFPKEAN QRWERVATAV PGKTVNQCKK KFALMKESFR SKKSGE*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	337	360	KRRKEEEDKRAAEANALQKKAKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11450.1	0.0	MYB family protein