PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0042s0072.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HSF

Protein Properties

Length: 342aa MW: 38600.2 Da PI: 7.0374

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0042s0072.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.5	7e-36	38	130	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91 Fl+k+y++++d+++++++sw e+ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ F+kg+k Kaladp0042s0072.1.p 38 FLTKTYHLVDDPSTDHVVSWGEDHSTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFRKGEK 118 9***************************************************************99.........********* PP XXXXXXXXXXXX CS HSF_DNA-bind 92 ellekikrkkse 103 +ll++i+r+k++ Kaladp0042s0072.1.p 119 HLLCEIQRRKTS 130 *******987 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MALIMENHNN GGSCCNYDDT MNNILLSLDS HKSVPAPFLT KTYHLVDDPS TDHVVSWGED 60 HSTFVVWRPP EFARDLLPNY FKHNNFSSFV RQLNTYGFRK IVPDRWEFAN EFFRKGEKHL 120 LCEIQRRKTS QPHVSINHHH HGHQGQYSQQ FGFGPHSYFP YPSRLSISPP DLDENNNINY 180 NGISCHVWGC DTDLSHPKIL SPTTSSMISG GGVGLCEDNE RLRRSNSMLM SELAHMRKLY 240 NDIIYFVQNH VKPVAPSNAY CPLSSPLVTA AARGVGNFND LSNNTSQSSV TVAENDDNDE 300 DENRRMRLFG VPLIRTTLSP SASKKRLHSE LGLNLMPPSP C*

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MALIMENHNN GGSCCNYDDT MNNILLSLDS HKSVPAPFLT KTYHLVDDPS TDHVVSWGED  60
HSTFVVWRPP EFARDLLPNY FKHNNFSSFV RQLNTYGFRK IVPDRWEFAN EFFRKGEKHL  120
LCEIQRRKTS QPHVSINHHH HGHQGQYSQQ FGFGPHSYFP YPSRLSISPP DLDENNNINY  180
NGISCHVWGC DTDLSHPKIL SPTTSSMISG GGVGLCEDNE RLRRSNSMLM SELAHMRKLY  240
NDIIYFVQNH VKPVAPSNAY CPLSSPLVTA AARGVGNFND LSNNTSQSSV TVAENDDNDE  300
DENRRMRLFG VPLIRTTLSP SASKKRLHSE LGLNLMPPSP C*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	1e-99	HSF family protein