PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0042s0045.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 449aa    MW: 49565.6 Da    PI: 9.2013
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0042s0045.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.42.3e-1736120898
                          -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                   B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                          + +++sgrl +p kf ++++gk  +++ + l  + g++W+v l   ++ ++ +l +GW++Fv++  ++ gD++vF+++g+ +f   v +f
  Kaladp0042s0045.2.p  36 APHSSSGRLEIPHKFNQHIEGK--TNVWVLLSGRGGKVWRVGL--VRQHQTLFLNEGWSGFVRDSSVELGDTLVFEYNGDWQF--EVYIF 119
                          6678899********9888888..677899999**********..9*******************************998888..88888 PP

                          - CS
                   B3  98 r 98 
                          +
  Kaladp0042s0045.2.p 120 D 120
                          7 PP
2B3443.9e-14276366598
                          -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                   B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                          ++  +v+ s  l +p kf +eh   ++++++++l++ +g  W+v+   + k  + +++ +GW  Fv+an++++gD ++F+l+++   +++
  Kaladp0042s0045.2.p 276 MKIFNVSGSFTLKIPYKFSTEHL--PQCKTKVVLQTCEGSCWTVNSVPTTKVHTcHTFCGGWVAFVRANHIEAGDACIFQLVSE--CKML 361
                          55557888899***********6..458899**************955333333588889********************9874..3358 PP

                          EEEE- CS
                   B3  94 vkvfr 98 
                          v++++
  Kaladp0042s0045.2.p 362 VHILK 366
                          88875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    
MRNSAKQKQA SKMATATTSA VKSSDGRKPH FIVTFAPHSS SGRLEIPHKF NQHIEGKTNV  60
WVLLSGRGGK VWRVGLVRQH QTLFLNEGWS GFVRDSSVEL GDTLVFEYNG DWQFEVYIFD  120
GSGCEKEVRE CMGNLGSNSR KRRERDEDES SGCVVKKKES IVCRSCNVDC VNEEPADLST  180
AECHPGAPVG EPLALIVYEE PGPSNLINGH PNYPPATALP SLCKFQSGTS GSTTKYKDVA  240
YKYTSQGKGS KLKFSASEEK ISRSFKSEFP HFVRVMKIFN VSGSFTLKIP YKFSTEHLPQ  300
CKTKVVLQTC EGSCWTVNSV PTTKVHTCHT FCGGWVAFVR ANHIEAGDAC IFQLVSECKM  360
LVHILKEGRQ ISESNGGEKS KFRSLASLSN DIKKLGLGSK NSSHGYGLPQ EAVDWKAGKC  420
LSLKLLLKCR HFFLKQIIKM KSVGVTEN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06220.14e-15B3 family protein