PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0042s0038.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 412aa MW: 46969 Da PI: 10.1322 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 50.7 | 3.3e-16 | 10 | 99 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 ffkv t+++++++ + +p++f++ + g +++ l +sg++W v+l + +++ ++t+GW+ Fvk+n ++ gDf+ Fkl+ + f Kaladp0042s0038.1.p 10 FFKVYTTEHSFNR--MKVPREFVAYMRGR-TCG-AAELAGPSGETWLVEL--VQEGKHLFFTDGWQTFVKENMVEYGDFLFFKLHCNLMF-- 93 8999999999975..8*******555555.565.89**************..999999*************************9875444.. PP EEEEE- CS B3 93 vvkvfr 98 v +f+ Kaladp0042s0038.1.p 94 SVVIFD 99 666665 PP | |||||||
2 | B3 | 59.8 | 4.7e-19 | 178 | 263 | 8 | 97 |
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 s+ + + l++p++f++e+++k e++ +++l+++++ sWev++ +++g++ l +GW F+++n+L++gD++ F+l++ + e+ v+v Kaladp0042s0038.1.p 178 SNLGLGNYLRFPRSFIRENSLKYESNEKMVLRTSNNSSWEVNI--INNGGAISLCRGWAAFARDNNLRVGDVCKFELVD--RLEMAVHVS 263 444555889**********99999999****************..99999**************************987..455567665 PP | |||||||
3 | B3 | 50.6 | 3.5e-16 | 315 | 406 | 1 | 96 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+ +++ +v + ++ +p f++e++ + ++++l++ sW+v+l ++ +y + +GW +Fv++n++kegD++ F+l + + Kaladp0042s0038.1.p 315 FVACMKKYHVKRPFIMNIPTWFVRENSVRYGRLQKMVLRTNGDSSWSVNL--LHNQHKYCFCGGWADFVRDNNIKEGDSCKFELLN--RL 400 556677778888899***********666678889***************..777778*************************876..45 PP ..EEEE CS B3 91 elvvkv 96 e++v++ Kaladp0042s0038.1.p 401 EMKVHL 406 556665 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 412 aa Download sequence |
MDEADNLPEF FKVYTTEHSF NRMKVPREFV AYMRGRTCGA AELAGPSGET WLVELVQEGK 60 HLFFTDGWQT FVKENMVEYG DFLFFKLHCN LMFSVVIFDE TMCEKGVALG AKCSRGRDGV 120 LEAEEVQNGA KPVKRNRVRR SLSKGIGSDL ITPDPKDRAA ERISTSVKAS FVQHIKISNL 180 GLGNYLRFPR SFIRENSLKY ESNEKMVLRT SNNSSWEVNI INNGGAISLC RGWAAFARDN 240 NLRVGDVCKF ELVDRLEMAV HVSQRHVEIR PEKVNAARSN LRPLTRAVGA SQPVLRRVGQ 300 KEAARSRPSS VKPSFVACMK KYHVKRPFIM NIPTWFVREN SVRYGRLQKM VLRTNGDSSW 360 SVNLLHNQHK YCFCGGWADF VRDNNIKEGD SCKFELLNRL EMKVHLMPRS K* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G24700.1 | 1e-20 | B3 family protein |