PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0042s0037.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 416aa    MW: 47892 Da    PI: 10.2955
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0042s0037.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.78e-1717106198
                          EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                          ffkv      ++++r+ +p +f++ + g + +     l  +sg++W+v+l   + +++ ++t+GW+ Fvk+n +++gDf+ Fkl+ +  f
  Kaladp0042s0037.1.p  17 FFKVY--IADHSLNRMKVPSEFVDYMRGRTWG--AAELAGPSGETWQVEL--AREGKHLFFTDGWQTFVKENMVEQGDFLFFKLHCNLMF 100
                          67777..455667889*******666777766..69999***********..*******************************9875444 PP

                          ..EEEEE- CS
                   B3  91 elvvkvfr 98 
                             v +f+
  Kaladp0042s0037.1.p 101 --SVVIFD 106
                          ..666665 PP
2B352.68.4e-171882671497
                          T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                   B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                            l++p +f++eh+++ e++ +++l ++++ sWev++   +++g++ l +GW  F+++ +L++gD++ F+l++r   e+ v+v 
  Kaladp0042s0037.1.p 188 YYLRFPQPFIREHSLNYESNEKMVLLTSNNSSWEVNI--INNGGAISLCRGWAAFARDINLRVGDVCKFELMDR--LEMAVHVS 267
                          56899********99999999****************..99999**************************9874..55566665 PP
3B3551.5e-17319413199
                          EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                          f+  +++ +v +  +l +p  f++e++    + ++++l+++   sW+v+l    ++ +y l +GW  Fv++n++kegD++ F+l++  + 
  Kaladp0042s0037.1.p 319 FVACMKKYHVKRPFILHIPTWFVRENSVRYGRLQKMVLRTTGDSSWSVNL--HHSQHKYRLYGGWAVFVRDNNIKEGDTCKFELVN--RL 404
                          556677778888899***********666678889***************..888888*************************976..67 PP

                          ..EEEEE-S CS
                   B3  91 elvvkvfrk 99 
                          e++v++ r+
  Kaladp0042s0037.1.p 405 EMKVHIMRR 413
                          789999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    
MRIDVEEEAD TDNLPEFFKV YIADHSLNRM KVPSEFVDYM RGRTWGAAEL AGPSGETWQV  60
ELAREGKHLF FTDGWQTFVK ENMVEQGDFL FFKLHCNLMF SVVIFDETMC EKGVDLGAKS  120
SRGRDGVLQA EKAQNGAKPV RKNKVRRSLS KGDLITSDPK DRAAERTSTS VKPSFLQHIK  180
ISNLQQGYYL RFPQPFIREH SLNYESNEKM VLLTSNNSSW EVNIINNGGA ISLCRGWAAF  240
ARDINLRVGD VCKFELMDRL EMAVHVSQRH VEIRPEKVNA ARLKLRPLTR AVGVSQRLLR  300
HEGKKEAARS RPSSVKPSFV ACMKKYHVKR PFILHIPTWF VRENSVRYGR LQKMVLRTTG  360
DSSWSVNLHH SQHKYRLYGG WAVFVRDNNI KEGDTCKFEL VNRLEMKVHI MRRSK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.11e-20B3 family protein