PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0041s0013.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YA
Protein Properties Length: 329aa    MW: 35905.9 Da    PI: 9.9098
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0041s0013.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA1032.7e-32156212158
            CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                          +ep+YVNaKQy++I++RRq Rak+e ekk+ +k+rkpylheSRh+hA+rR+Rg+gGrF
  Kaladp0041s0013.1.p 156 EEPVYVNAKQYNGIMRRRQIRAKAELEKKV-IKNRKPYLHESRHQHAMRRARGCGGRF 212
                          69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MMQMKAESGN QRAGYSQQSR WQGFENTDNS STGIRERSLR STSENVNLVT VGAIDSQFSS  60
SMNIAGNFNK VIPSGIALRP DGYSGQGNQT LTTSQSTMSE NPSESTPREL VDGSMVAASY  120
PYRDPSYGAI VAPYGQQPLV YGVNQARMAL PLEMEEEPVY VNAKQYNGIM RRRQIRAKAE  180
LEKKVIKNRK PYLHESRHQH AMRRARGCGG RFLNTKKLNS ETSNSTSAAL DGTQHNGTLS  240
NQLILPRGLG NNLPASSSGY LYPLTEPQNS SFVPDTSMGH NIVSFGSSSS SNIGGHDRSS  300
RYQTLPGDAQ AYSSMQMTGP PRRTYPIT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.14e-42NF-YA family protein