PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0041s0010.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 330aa MW: 37172.3 Da PI: 6.4431

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0041s0010.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.6	1.2e-06	167	186	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 y+Cp C ksFsr nL+ H+ Kaladp0041s0010.1.p 167 YSCPVCFKSFSRYNNLQMHM 186 99*****************9 PP
2	zf-C2H2	17.2	1.4e-05	251	273	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +CgksF k + ++H +++ Kaladp0041s0010.1.p 251 FTCRKCGKSFAVKGDWRTHEKNC 273 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MEDFLSSDNS SVTCNGLSYF NFIPLNPNPN SLPRTLPLLD KNEPAQSSPA TTPMDEDYYC 60 GSCFCNNKRR SGRGSSSTNV ALSLNIGLPD DETYSSTVVS SSSSSSNLLE LHKSLFGDEP 120 FQEEGEEDEE EDHDDEMGLL ECIPLERSAT QYWIPTPTQI LNGPTQYSCP VCFKSFSRYN 180 NLQMHMWGHG SQYRKGTESL RGVQPRAMLR LPCYCCTQGC KHHIDHPKSR PLKDFRTLQT 240 HYKRKHGTKS FTCRKCGKSF AVKGDWRTHE KNCGKFWYCA CGSDFKHKRS LKDHVRAYKE 300 DGQAGHAAIG IEDYMEHDGD DHGCVIESE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-96	C2H2 family protein