PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0040s0439.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 356aa MW: 39001.2 Da PI: 6.5114 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.6 | 5.8e-18 | 33 | 80 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +v+q+G +W+++++ g+ R+ k+c++rw +yl Kaladp0040s0439.1.p 33 KGPWTPEEDIILVSYVQQHGASNWRAVPANAGLLRCSKSCRLRWTNYL 80 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 44.8 | 2.8e-14 | 86 | 130 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T +E++ ++++ ++lG++ W++Ia++++ Rt++++k++w++ Kaladp0040s0439.1.p 86 RGNFTDQEQKMIIHLQALLGNR-WAAIASYLP-QRTENDIKNYWNTN 130 89********************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 356 aa Download sequence |
MERSPSRSDD HSHCNSSSGS KTTASASSGG LKKGPWTPEE DIILVSYVQQ HGASNWRAVP 60 ANAGLLRCSK SCRLRWTNYL RPGIKRGNFT DQEQKMIIHL QALLGNRWAA IASYLPQRTE 120 NDIKNYWNTN LRKKAIKNQL GHCGLGEDHE GGSSLLSYSV DQSAATKGQW ERRLQTDINL 180 AKQALSRALA VDDTDLELAS SDQTRHQLMA GTSNSFIDSV TPSPTISTTY ASSTANISKL 240 LDGWMKKKEP AVPSAATSSY AATQFNGVNQ FGNITCASSS REYYDQFDEY METKPYVDSQ 300 VPLLEKWLMF DDGGNNAAAS SAPGGTSQDQ LAAHELMSTD VTTFDQQNII DSMFF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28910.1 | 4e-89 | MYB family protein |