PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0040s0339.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 609aa MW: 65830.2 Da PI: 7.6154

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0040s0339.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.2	5.3e-31	348	406	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ Kaladp0040s0339.1.p 348 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDTTILITTYEGNHNHP 406 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 609 aa Download sequence
MDRGWGVTTV AEADRSVIPF FASKPSVINS FYSLKHSGGS SGSGMKIFPV SLSGSRERDM 60 PEGSGRRVVD EVDFFSGERE IMKAAAARDG ENSGVSVKEE VLHGEPILTK SDLNVNTRLD 120 LLTSNAGSDQ STVEDGRALD DKRTKTSQVS QMQLELGRLN AENQRLKEMF TQVSNNYQAL 180 QMHLIAFMQQ HQQQQQQQQL QAPVLESAQD HEMGGRKSED KVVAAPALPR QFLNLGPGSV 240 SQEPDELSNS SSGERTHSGS QHNNNLEIAS KRPRSDQENS RDGKGLADRE DSPDSETQGW 300 SRNNKAAKLG NNGNVVCETK QVEQQPTEAT MRKARVSVRA RSEAPMISDG CQWRKYGQKM 360 AKGNPCPRAY YRCTMAVGCP VRKQVQRCAE DTTILITTYE GNHNHPLPPA AVAMASTTSA 420 AASMLLSGSM SSTDGLMNPN FLARAILPCS SNIATISASA PFPTVTLDLT HSPNPLQLQR 480 QQRQQLQQQP PFAMPAANSL PQIFGPALYN QSRFSGLQLS QDPNLASKGL PLPVPIPPPS 540 LSQGQHTSFA DTVSAATAAI TNDPNFTAVI AAAISSFISA NNQRPNSDSS NPNTKSTPAT 600 TQQHHNQQ*

Sequence ? help Back to Top

Protein Sequence Length: 609 aa Download sequence

MDRGWGVTTV AEADRSVIPF FASKPSVINS FYSLKHSGGS SGSGMKIFPV SLSGSRERDM  60
PEGSGRRVVD EVDFFSGERE IMKAAAARDG ENSGVSVKEE VLHGEPILTK SDLNVNTRLD  120
LLTSNAGSDQ STVEDGRALD DKRTKTSQVS QMQLELGRLN AENQRLKEMF TQVSNNYQAL  180
QMHLIAFMQQ HQQQQQQQQL QAPVLESAQD HEMGGRKSED KVVAAPALPR QFLNLGPGSV  240
SQEPDELSNS SSGERTHSGS QHNNNLEIAS KRPRSDQENS RDGKGLADRE DSPDSETQGW  300
SRNNKAAKLG NNGNVVCETK QVEQQPTEAT MRKARVSVRA RSEAPMISDG CQWRKYGQKM  360
AKGNPCPRAY YRCTMAVGCP VRKQVQRCAE DTTILITTYE GNHNHPLPPA AVAMASTTSA  420
AASMLLSGSM SSTDGLMNPN FLARAILPCS SNIATISASA PFPTVTLDLT HSPNPLQLQR  480
QQRQQLQQQP PFAMPAANSL PQIFGPALYN QSRFSGLQLS QDPNLASKGL PLPVPIPPPS  540
LSQGQHTSFA DTVSAATAAI TNDPNFTAVI AAAISSFISA NNQRPNSDSS NPNTKSTPAT  600
TQQHHNQQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-120	WRKY family protein