PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0040s0192.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 338aa    MW: 37739.7 Da    PI: 4.5059
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0040s0192.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.34.2e-11186229654
                          HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                           ++ErrRR+r+N++++ Lr+++P  +      K++  +iL  +++Y+k+L
  Kaladp0040s0192.2.p 186 LMAERRRRKRLNDRLSMLRSIVPRiS------KMDRTSILADTIDYMKEL 229
                          589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MELSQPFLLE EWLAMKRENC STYQTGVEMS EFYTDGWSCD FIDEPQALAA STDVAMGTAT  60
GFAMPQMEPY FDVPFSEVYN TLDACFDAPA PAAADQFNLA YEINNGATLL PPIPDQNTSM  120
MDEDFTFFSN DCVELMKEDK HASGCKVEMV LSPNENLGSS TSKMSGGGRE RRNGAKKAGG  180
QPSKNLMAER RRRKRLNDRL SMLRSIVPRI SKMDRTSILA DTIDYMKELI EKVSKLEEEE  240
EEHTEAGPIN KLKELKSSEG QAKNSPKFDV KMGEKDTRID ICCTTRPGLL LTTVNTLEAL  300
GLEIQQCVIS CFNDFSMQAA CSQVYTQQVR QPNRIQL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189196ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.13e-53bHLH family protein