PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0040s0154.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

SBP

Protein Properties

Length: 341aa MW: 37819.1 Da PI: 8.5518

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0040s0154.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	122.3	2.2e-38	60	133	5	78
TT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 5 egCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +gC a+ls++++yhrrhkvCe+hsk++ v++ g+eqrfCqqCsrfh+l efD++krsCr+rL++hn+rrrk+q+ Kaladp0040s0154.1.p 60 DGCVANLSKCRDYHRRHKVCEAHSKTSRVTIGGQEQRFCQQCSRFHSLGEFDDSKRSCRKRLDGHNRRRRKPQP 133 79*********************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MWDLLQGHHI GTSLTSSKRA YSLMLLSFAL AFRVLKKICV VNLKLERMGD INIFVDRYSD 60 GCVANLSKCR DYHRRHKVCE AHSKTSRVTI GGQEQRFCQQ CSRFHSLGEF DDSKRSCRKR 120 LDGHNRRRRK PQPDSLYLSS SKYISTHQGS KFVSYGTQYF PNSAVAASSW NDAAKAENNH 180 PYPSNSQLNF GANNFPSCFS QGYSGEKQFP FLQSADQSVH VSQPHLSITL EDVASSNSGH 240 KLLSSDGFDR VIDSDRASSL LSSSHPETSR FTPTQLVLCP TQPSIPTHLY NGVATESASA 300 MDSPLLADSR SNNGNSSMDF PEIIQNGSDV CHQTISFSWG *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	114	131	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	2e-44	SBP family protein