PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0039s0564.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 1049aa MW: 115938 Da PI: 6.8468

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0039s0564.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00087	1013	1039	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 ykC+ Cg sF+ s++ rH r+ H Kaladp0039s0564.3.p 1013 YKCKaeGCGVSFRFISDFSRHRRKtgH 1039 99*********************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 1049 aa Download sequence
MMLGEKTTLL SPEVVVASGI PCCRLVQNPG EFVVTFPRAY HVGFSHGFNC GEAANFGTPQ 60 WLKVAKEAAV RRAAMNFLPM LSHQQLLYLL AMSFLTRVPR ALLVGARSSR LRDRMKEERE 120 LSVKKAFIED ILNEDKLLSV LRGAKSTYRA VLWDPESLPS LSKEPSLLSK MENTAANASD 180 SSNSCVFQSN HNLLDEMRFY TETMKDDYVD DDGFLSDFQV DYGAVACVAC GILGFPFMTV 240 VQPSEAASLH LRPLVENKSV AQDISCLDLD VSIDHSVSVL STPVVSSNMK VNKDQNASHR 300 FFRPRVFCLE HAVQVIELLE SKGGAEVLVI CHSDFQKIKS QAAAVAGELG SQYNYDMVPL 360 DCASLEDLNL IDLAVDEDRE ESDEDWSSVL GINLRCCIKM RKNSSSKHVD LALKLFGLPS 420 NITLGSSLSH LKWQHTRSRS KTPVLHDSKQ VSKLLSNRIK KEKKIIQYKR RKSKPKSFGS 480 APVRNTSLDC EENSASVSSD TDIAGINMSE LDNSVNINKS PASMTELNQV EGSLVTPCPS 540 LEIMHSDIVD QLEESGSVRC VCVSTSVDVV GVDNGVHDTR YKGETSLNCA VEHSSCADSP 600 VRMEGMSASE NNGQIRSTDT TNIKDTIEHE IAIHVDGKNV LTSMEPDLVA GGIPSAANPM 660 LGKTHMDNFT EWEVKDEVCA VIPHNERSNE GSPSLLSQSL TQMSAFEGSS TLLPLASCST 720 EEYVLVKDTQ SSKVADTPGT EENLCSASLD KLRDNSINAE PAYLVSIETS VGDDSSYEVV 780 QIRTLKGVDD KEDPNNCRLT DFNQVSLMSA GDESAAAKYM GASKNLYDVK TGETENNRVK 840 PKPSNRNARK RNRELEKLRD NKNEVADFIR SPCEGLRPRS KIASSSHNID VRHSYTEEPA 900 IAKKKLKHIP ADTSTSTPNK TGKQESKGWH RCDLECCILS FKTKAKLLLH QQNQCHIQGC 960 GKKFSCHRYL IVHQRVHVDD RPLKCSWKGC NMSFKWAWAR TEHLRVHTGE RPYKCKAEGC 1020 GVSFRFISDF SRHRRKTGHG GDTHSPLG*

Sequence ? help Back to Top

Protein Sequence Length: 1049 aa Download sequence

MMLGEKTTLL SPEVVVASGI PCCRLVQNPG EFVVTFPRAY HVGFSHGFNC GEAANFGTPQ  60
WLKVAKEAAV RRAAMNFLPM LSHQQLLYLL AMSFLTRVPR ALLVGARSSR LRDRMKEERE  120
LSVKKAFIED ILNEDKLLSV LRGAKSTYRA VLWDPESLPS LSKEPSLLSK MENTAANASD  180
SSNSCVFQSN HNLLDEMRFY TETMKDDYVD DDGFLSDFQV DYGAVACVAC GILGFPFMTV  240
VQPSEAASLH LRPLVENKSV AQDISCLDLD VSIDHSVSVL STPVVSSNMK VNKDQNASHR  300
FFRPRVFCLE HAVQVIELLE SKGGAEVLVI CHSDFQKIKS QAAAVAGELG SQYNYDMVPL  360
DCASLEDLNL IDLAVDEDRE ESDEDWSSVL GINLRCCIKM RKNSSSKHVD LALKLFGLPS  420
NITLGSSLSH LKWQHTRSRS KTPVLHDSKQ VSKLLSNRIK KEKKIIQYKR RKSKPKSFGS  480
APVRNTSLDC EENSASVSSD TDIAGINMSE LDNSVNINKS PASMTELNQV EGSLVTPCPS  540
LEIMHSDIVD QLEESGSVRC VCVSTSVDVV GVDNGVHDTR YKGETSLNCA VEHSSCADSP  600
VRMEGMSASE NNGQIRSTDT TNIKDTIEHE IAIHVDGKNV LTSMEPDLVA GGIPSAANPM  660
LGKTHMDNFT EWEVKDEVCA VIPHNERSNE GSPSLLSQSL TQMSAFEGSS TLLPLASCST  720
EEYVLVKDTQ SSKVADTPGT EENLCSASLD KLRDNSINAE PAYLVSIETS VGDDSSYEVV  780
QIRTLKGVDD KEDPNNCRLT DFNQVSLMSA GDESAAAKYM GASKNLYDVK TGETENNRVK  840
PKPSNRNARK RNRELEKLRD NKNEVADFIR SPCEGLRPRS KIASSSHNID VRHSYTEEPA  900
IAKKKLKHIP ADTSTSTPNK TGKQESKGWH RCDLECCILS FKTKAKLLLH QQNQCHIQGC  960
GKKFSCHRYL IVHQRVHVDD RPLKCSWKGC NMSFKWAWAR TEHLRVHTGE RPYKCKAEGC  1020
GVSFRFISDF SRHRRKTGHG GDTHSPLG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	1e-132	C2H2 family protein