PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0039s0564.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 975aa MW: 107992 Da PI: 6.7081

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0039s0564.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.7	0.0008	939	965	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 ykC+ Cg sF+ s++ rH r+ H Kaladp0039s0564.2.p 939 YKCKaeGCGVSFRFISDFSRHRRKtgH 965 99*********************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 975 aa Download sequence
MNFLPMLSHQ QLLYLLAMSF LTRVPRALLV GARSSRLRDR MKEERELSVK KAFIEDILNE 60 DKLLSVLRGA KSTYRAVLWD PESLPSLSKE PSLLSKMENT AANASDSSNS CVFQSNHNLL 120 DEMRFYTETM KDDYVDDDGF LSDFQVDYGA VACVACGILG FPFMTVVQPS EAASLHLRPL 180 VENKSVAQDI SCLDLDVSID HSVSVLSTPV VSSNMKVNKD QNASHRFFRP RVFCLEHAVQ 240 VIELLESKGG AEVLVICHSD FQKIKSQAAA VAGELGSQYN YDMVPLDCAS LEDLNLIDLA 300 VDEDREESDE DWSSVLGINL RCCIKMRKNS SSKHVDLALK LFGLPSNITL GSSLSHLKWQ 360 HTRSRSKTPV LHDSKQVSKL LSNRIKKEKK IIQYKRRKSK PKSFGSAPVR NTSLDCEENS 420 ASVSSDTDIA GINMSELDNS VNINKSPASM TELNQVEGSL VTPCPSLEIM HSDIVDQLEE 480 SGSVRCVCVS TSVDVVGVDN GVHDTRYKGE TSLNCAVEHS SCADSPVRME GMSASENNGQ 540 IRSTDTTNIK DTIEHEIAIH VDGKNVLTSM EPDLVAGGIP SAANPMLGKT HMDNFTEWEV 600 KDEVCAVIPH NERSNEGSPS LLSQSLTQMS AFEGSSTLLP LASCSTEEYV LVKDTQSSKV 660 ADTPGTEENL CSASLDKLRD NSINAEPAYL VSIETSVGDD SSYEVVQIRT LKGVDDKEDP 720 NNCRLTDFNQ VSLMSAGDES AAAKYMGASK NLYDVKTGET ENNRVKPKPS NRNARKRNRE 780 LEKLRDNKNE VADFIRSPCE GLRPRSKIAS SSHNIDVRHS YTEEPAIAKK KLKHIPADTS 840 TSTPNKTGKQ ESKGWHRCDL ECCILSFKTK AKLLLHQQNQ CHIQGCGKKF SCHRYLIVHQ 900 RVHVDDRPLK CSWKGCNMSF KWAWARTEHL RVHTGERPYK CKAEGCGVSF RFISDFSRHR 960 RKTGHGGDTH SPLG*

Sequence ? help Back to Top

Protein Sequence Length: 975 aa Download sequence

MNFLPMLSHQ QLLYLLAMSF LTRVPRALLV GARSSRLRDR MKEERELSVK KAFIEDILNE  60
DKLLSVLRGA KSTYRAVLWD PESLPSLSKE PSLLSKMENT AANASDSSNS CVFQSNHNLL  120
DEMRFYTETM KDDYVDDDGF LSDFQVDYGA VACVACGILG FPFMTVVQPS EAASLHLRPL  180
VENKSVAQDI SCLDLDVSID HSVSVLSTPV VSSNMKVNKD QNASHRFFRP RVFCLEHAVQ  240
VIELLESKGG AEVLVICHSD FQKIKSQAAA VAGELGSQYN YDMVPLDCAS LEDLNLIDLA  300
VDEDREESDE DWSSVLGINL RCCIKMRKNS SSKHVDLALK LFGLPSNITL GSSLSHLKWQ  360
HTRSRSKTPV LHDSKQVSKL LSNRIKKEKK IIQYKRRKSK PKSFGSAPVR NTSLDCEENS  420
ASVSSDTDIA GINMSELDNS VNINKSPASM TELNQVEGSL VTPCPSLEIM HSDIVDQLEE  480
SGSVRCVCVS TSVDVVGVDN GVHDTRYKGE TSLNCAVEHS SCADSPVRME GMSASENNGQ  540
IRSTDTTNIK DTIEHEIAIH VDGKNVLTSM EPDLVAGGIP SAANPMLGKT HMDNFTEWEV  600
KDEVCAVIPH NERSNEGSPS LLSQSLTQMS AFEGSSTLLP LASCSTEEYV LVKDTQSSKV  660
ADTPGTEENL CSASLDKLRD NSINAEPAYL VSIETSVGDD SSYEVVQIRT LKGVDDKEDP  720
NNCRLTDFNQ VSLMSAGDES AAAKYMGASK NLYDVKTGET ENNRVKPKPS NRNARKRNRE  780
LEKLRDNKNE VADFIRSPCE GLRPRSKIAS SSHNIDVRHS YTEEPAIAKK KLKHIPADTS  840
TSTPNKTGKQ ESKGWHRCDL ECCILSFKTK AKLLLHQQNQ CHIQGCGKKF SCHRYLIVHQ  900
RVHVDDRPLK CSWKGCNMSF KWAWARTEHL RVHTGERPYK CKAEGCGVSF RFISDFSRHR  960
RKTGHGGDTH SPLG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	2e-87	C2H2 family protein