PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0039s0564.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 1426aa MW: 158216 Da PI: 6.8866

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0039s0564.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.1	0.0012	1390	1416	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 ykC+ Cg sF+ s++ rH r+ H Kaladp0039s0564.1.p 1390 YKCKaeGCGVSFRFISDFSRHRRKtgH 1416 99*********************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 1426 aa Download sequence
MRDVEVPHWL IKLPLAPEFR PTDTEFADPI AYISKIENEA RAFGICKIIP PLPRPSKKYV 60 FSNLNRSLLK SPELGSDATA VKSCSGVNEG EVRAVFTTRQ QELGHTEKKD KAAIHMGQGA 120 VNKQVWQSGE LYTLDQFESK AKAFYRSTLG MVKDISPLAI EALFWKADSE NHVYVEYAND 180 VPGSGFGEPS GNGSFQHFHK RRRKRVFRRT TESSRKKYEV CGANESHADI QENNLSSETS 240 NVIVKVNTHV DAPVSSDKTA SVYHQDKSDS TTDIEGTAGW KLSNCPWNLQ VIARSPGSLT 300 RFMPDDIPGV TSPMVYIGML FSWFAWHVED HELHSLNFLH TGSSKTWYSV PGDYAFAFEE 360 VIRTRAYGEN VDRLAALMML GEKTTLLSPE VVVASGIPCC RLVQNPGEFV VTFPRAYHVG 420 FSHGFNCGEA ANFGTPQWLK VAKEAAVRRA AMNFLPMLSH QQLLYLLAMS FLTRVPRALL 480 VGARSSRLRD RMKEERELSV KKAFIEDILN EDKLLSVLRG AKSTYRAVLW DPESLPSLSK 540 EPSLLSKMEN TAANASDSSN SCVFQSNHNL LDEMRFYTET MKDDYVDDDG FLSDFQVDYG 600 AVACVACGIL GFPFMTVVQP SEAASLHLRP LVENKSVAQD ISCLDLDVSI DHSVSVLSTP 660 VVSSNMKVNK DQNASHRFFR PRVFCLEHAV QVIELLESKG GAEVLVICHS DFQKIKSQAA 720 AVAGELGSQY NYDMVPLDCA SLEDLNLIDL AVDEDREESD EDWSSVLGIN LRCCIKMRKN 780 SSSKHVDLAL KLFGLPSNIT LGSSLSHLKW QHTRSRSKTP VLHDSKQVSK LLSNRIKKEK 840 KIIQYKRRKS KPKSFGSAPV RNTSLDCEEN SASVSSDTDI AGINMSELDN SVNINKSPAS 900 MTELNQVEGS LVTPCPSLEI MHSDIVDQLE ESGSVRCVCV STSVDVVGVD NGVHDTRYKG 960 ETSLNCAVEH SSCADSPVRM EGMSASENNG QIRSTDTTNI KDTIEHEIAI HVDGKNVLTS 1020 MEPDLVAGGI PSAANPMLGK THMDNFTEWE VKDEVCAVIP HNERSNEGSP SLLSQSLTQM 1080 SAFEGSSTLL PLASCSTEEY VLVKDTQSSK VADTPGTEEN LCSASLDKLR DNSINAEPAY 1140 LVSIETSVGD DSSYEVVQIR TLKGVDDKED PNNCRLTDFN QVSLMSAGDE SAAAKYMGAS 1200 KNLYDVKTGE TENNRVKPKP SNRNARKRNR ELEKLRDNKN EVADFIRSPC EGLRPRSKIA 1260 SSSHNIDVRH SYTEEPAIAK KKLKHIPADT STSTPNKTGK QESKGWHRCD LECCILSFKT 1320 KAKLLLHQQN QCHIQGCGKK FSCHRYLIVH QRVHVDDRPL KCSWKGCNMS FKWAWARTEH 1380 LRVHTGERPY KCKAEGCGVS FRFISDFSRH RRKTGHGGDT HSPLG*

Sequence ? help Back to Top

Protein Sequence Length: 1426 aa Download sequence

MRDVEVPHWL IKLPLAPEFR PTDTEFADPI AYISKIENEA RAFGICKIIP PLPRPSKKYV  60
FSNLNRSLLK SPELGSDATA VKSCSGVNEG EVRAVFTTRQ QELGHTEKKD KAAIHMGQGA  120
VNKQVWQSGE LYTLDQFESK AKAFYRSTLG MVKDISPLAI EALFWKADSE NHVYVEYAND  180
VPGSGFGEPS GNGSFQHFHK RRRKRVFRRT TESSRKKYEV CGANESHADI QENNLSSETS  240
NVIVKVNTHV DAPVSSDKTA SVYHQDKSDS TTDIEGTAGW KLSNCPWNLQ VIARSPGSLT  300
RFMPDDIPGV TSPMVYIGML FSWFAWHVED HELHSLNFLH TGSSKTWYSV PGDYAFAFEE  360
VIRTRAYGEN VDRLAALMML GEKTTLLSPE VVVASGIPCC RLVQNPGEFV VTFPRAYHVG  420
FSHGFNCGEA ANFGTPQWLK VAKEAAVRRA AMNFLPMLSH QQLLYLLAMS FLTRVPRALL  480
VGARSSRLRD RMKEERELSV KKAFIEDILN EDKLLSVLRG AKSTYRAVLW DPESLPSLSK  540
EPSLLSKMEN TAANASDSSN SCVFQSNHNL LDEMRFYTET MKDDYVDDDG FLSDFQVDYG  600
AVACVACGIL GFPFMTVVQP SEAASLHLRP LVENKSVAQD ISCLDLDVSI DHSVSVLSTP  660
VVSSNMKVNK DQNASHRFFR PRVFCLEHAV QVIELLESKG GAEVLVICHS DFQKIKSQAA  720
AVAGELGSQY NYDMVPLDCA SLEDLNLIDL AVDEDREESD EDWSSVLGIN LRCCIKMRKN  780
SSSKHVDLAL KLFGLPSNIT LGSSLSHLKW QHTRSRSKTP VLHDSKQVSK LLSNRIKKEK  840
KIIQYKRRKS KPKSFGSAPV RNTSLDCEEN SASVSSDTDI AGINMSELDN SVNINKSPAS  900
MTELNQVEGS LVTPCPSLEI MHSDIVDQLE ESGSVRCVCV STSVDVVGVD NGVHDTRYKG  960
ETSLNCAVEH SSCADSPVRM EGMSASENNG QIRSTDTTNI KDTIEHEIAI HVDGKNVLTS  1020
MEPDLVAGGI PSAANPMLGK THMDNFTEWE VKDEVCAVIP HNERSNEGSP SLLSQSLTQM  1080
SAFEGSSTLL PLASCSTEEY VLVKDTQSSK VADTPGTEEN LCSASLDKLR DNSINAEPAY  1140
LVSIETSVGD DSSYEVVQIR TLKGVDDKED PNNCRLTDFN QVSLMSAGDE SAAAKYMGAS  1200
KNLYDVKTGE TENNRVKPKP SNRNARKRNR ELEKLRDNKN EVADFIRSPC EGLRPRSKIA  1260
SSSHNIDVRH SYTEEPAIAK KKLKHIPADT STSTPNKTGK QESKGWHRCD LECCILSFKT  1320
KAKLLLHQQN QCHIQGCGKK FSCHRYLIVH QRVHVDDRPL KCSWKGCNMS FKWAWARTEH  1380
LRVHTGERPY KCKAEGCGVS FRFISDFSRH RRKTGHGGDT HSPLG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	0.0	C2H2 family protein