PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0039s0505.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 274aa MW: 31001.3 Da PI: 6.7182 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.6 | 2.4e-17 | 19 | 66 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd l++ ++ +G g+W++ ar g++Rt+k+c++rw++yl Kaladp0039s0505.1.p 19 RGSWTVEEDTMLIHHITAHGEGNWNSLARSSGLKRTGKSCRLRWLNYL 66 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 45.7 | 1.5e-14 | 72 | 116 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E + +++ ++G+ +W++Ia+ ++ gRt++++k++w++ Kaladp0039s0505.1.p 72 RGNLTPQEKSTIFQLHSKWGNSRWSKIAQQLP-GRTDNEIKNYWRT 116 7999****************************.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MSARNCGADE PVQQSELRRG SWTVEEDTML IHHITAHGEG NWNSLARSSG LKRTGKSCRL 60 RWLNYLKPDI KRGNLTPQEK STIFQLHSKW GNSRWSKIAQ QLPGRTDNEI KNYWRTRMQN 120 QARQLKRVQS DRFLESVRGF WVPTTTLDVK GDADYSSLVS NSSSQQQLKN RHHHPLSCSS 180 PSSFVFPREA DDSMGFLELK TVVDSPSANT TAGAYKYPEF YHSLEDLSFA TTMSAAAAAD 240 DDCGLLQAAR DDWMADDETT DTAWNTDELW QFS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 1e-64 | MYB family protein |