PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0039s0361.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 265aa    MW: 29129.6 Da    PI: 7.1474
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0039s0361.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.12.3e-09655346
                         SS-HHHHHHHHHHHHHTTTT.......-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding  3 rWTteEdellvdavkqlGgg.......tWktIartmgkgRtlkqcksrwqk 46
                         +WT +Ed+ + da++ +  +       +W++Ia  ++ +++  q+k++++ 
  Kaladp0039s0361.1.p  6 SWTIDEDKAFEDAIATHWIEnledsdeHWEKIAVAVP-TKSIHQLKHHYRL 55
                         7*****************99*****************.***********96 PP
2Myb_DNA-binding39.21.6e-12123167347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          +WT+eE+ l++ +  ++G+g+W++I+r +   Rt+ q+ s+ qky
  Kaladp0039s0361.1.p 123 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKY 167
                          7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MSSSSSWTID EDKAFEDAIA THWIENLEDS DEHWEKIAVA VPTKSIHQLK HHYRLLVDDV  60
KDIDAGIIPL PEYVGDDNWP SSSSKKTAAF ADNISKKSNG NFPGNESNGK AGRSEQERRK  120
GIPWTEEEHR LFLLGLDKFG KGDWRSISRN FVISRTPTQV ASHAQKYFIR LSSMNRDRRR  180
SSIHDITSVN NGDISTHEPP ITGQPGSTNP NVGGIVKGMY GGPVGQVVGA PVGHVAAVGT  240
PVMMPPYVVP VPYPVTPQRM HQQS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.14e-66MYB family protein