PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0039s0358.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | NF-YA | ||||||||
Protein Properties | Length: 214aa MW: 23836.5 Da PI: 9.5777 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 104.6 | 9e-33 | 118 | 174 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep++VNaKQy++Il+RRq+Rak+e+ekkl +ksrkpylheSRh hAlrR+Rg+gGrF Kaladp0039s0358.3.p 118 EEPVFVNAKQYHGILRRRQSRAKAESEKKL-AKSRKPYLHESRHLHALRRARGCGGRF 174 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MKKNPKITSS VHDPSDYSEA EERQNLTEPQ NQAATDVMMS HSGVRAPNVQ YTTPLQLGTG 60 HTMAPGAYPY PDPYYRSIFA PYDPPSFPSQ SYNPQPMVHM QLMGMQQAGV PLHTDAVEEP 120 VFVNAKQYHG ILRRRQSRAK AESEKKLAKS RKPYLHESRH LHALRRARGC GGRFLNGKKN 180 DNQQNEVPTG DSSQLNALDN SSRANNVQSD GTY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 1e-43 | NF-YA family protein |