PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0039s0287.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 343aa MW: 39243.7 Da PI: 5.5058 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.7 | 6.4e-19 | 45 | 92 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +l +++q+G g+W++ ar g++Rt+k+c++rw++yl Kaladp0039s0287.1.p 45 RGPWTDEEDHILSSYIAQHGEGRWNSLARSAGLNRTGKSCRLRWLNYL 92 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.9 | 7.2e-16 | 98 | 141 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ + eE++l++d++ ++G++ W++Ia++++ gRt++++k++w++ Kaladp0039s0287.1.p 98 RGNISLEEQLLILDLHSRWGNR-WSKIAKYLP-GRTDNEIKNYWRT 141 78899*****************.*********.***********96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 343 aa Download sequence |
MNNHHDGRGV FTANNNSSSS SSSSWSKQSQ EEEHEDVMME EDLRRGPWTD EEDHILSSYI 60 AQHGEGRWNS LARSAGLNRT GKSCRLRWLN YLRPDVRRGN ISLEEQLLIL DLHSRWGNRW 120 SKIAKYLPGR TDNEIKNYWR TRVQKHAKLL KCDVNSQQFR DAIRYLWMPR LVERIHGAAS 180 ATDDIHNTTT TCLFHHNNNN NHTAAGFTNP SGMMREDEPY GSYLQHQQVS PFSDLMDDYA 240 PADDINSEYY YNGGAGNDSA VKAVGFDCNN YIDQTGVMMG YGGGDQMHPN NNNNSNSDNG 300 WLMMQSGDVS DSMWSLDDFW FNNSQPPQQD YQQQQFNTNS FS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G48000.1 | 5e-82 | MYB family protein |