PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0039s0206.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | SBP | ||||||||
Protein Properties | Length: 132aa MW: 14713.5 Da PI: 10.0427 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 131.9 | 2.2e-41 | 50 | 126 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cqve+C+ad+s+ak+yhrrhkvCe+h+k + ++v+gl+qrfCqqCsrfh +sefDe krsCrrrLa+hn+rrrk+++ Kaladp0039s0206.2.p 50 CQVENCTADMSDAKQYHRRHKVCEFHAKVQIAVVAGLQQRFCQQCSRFHLVSEFDEFKRSCRRRLAGHNQRRRKNTH 126 **************************************************************************875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 132 aa Download sequence |
MRPGECASGR GSVSGPTGHD TVRSSSSSTG WTPVPQHQLP SWNPQPLSLC QVENCTADMS 60 DAKQYHRRHK VCEFHAKVQI AVVAGLQQRF CQQCSRFHLV SEFDEFKRSC RRRLAGHNQR 120 RRKNTHACPA G* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33810.1 | 7e-41 | SBP family protein |