PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0039s0206.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family SBP
Protein Properties Length: 268aa    MW: 30344 Da    PI: 7.8877
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0039s0206.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP129.61.1e-40186262278
                          -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
                  SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                          Cqve+C+ad+s+ak+yhrrhkvCe+h+k + ++v+gl+qrfCqqCsrfh +sefDe krsCrrrLa+hn+rrrk+++
  Kaladp0039s0206.1.p 186 CQVENCTADMSDAKQYHRRHKVCEFHAKVQIAVVAGLQQRFCQQCSRFHLVSEFDEFKRSCRRRLAGHNQRRRKNTH 262
                          **************************************************************************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MWKTFCALFP NRRSSIITSI SLFPLPSSYH TIWPLERGRE IRGQRSFSWL SISTLKVCFS  60
ALFSKFELQP FSPLYCSSSS SSSLLKQESI AMDRRRDEGV RRSFKEEPVF GEDEEVVEGG  120
DEDAEDEDYD VESLLDMRPG ECASGRGSVS GPTGHDTVRS SSSSTGWTPV PQHQLPSWNP  180
QPLSLCQVEN CTADMSDAKQ YHRRHKVCEF HAKVQIAVVA GLQQRFCQQC SRFHLVSEFD  240
EFKRSCRRRL AGHNQRRRKN THACPAG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.11e-39SBP family protein