PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0039s0162.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 310aa MW: 33726.6 Da PI: 7.2429 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.5 | 1.2e-16 | 32 | 79 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEdell ++++q G g W+t +++ g+ R++k+c++rw +yl Kaladp0039s0162.1.p 32 RGPWTAEEDELLTKCINQQGEGKWRTLPKRAGLVRCGKSCRLRWMNYL 79 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 47.1 | 5.7e-15 | 90 | 130 | 6 | 48 |
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l Kaladp0039s0162.1.p 90 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 130 89***************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence |
MRNPSSSASS SPANEKKKSS RNSSGKMVGL KRGPWTAEED ELLTKCINQQ GEGKWRTLPK 60 RAGLVRCGKS CRLRWMNYLH PSVKRGQIAP DEEDLILRLH RLLGNRWSLI AGRIPGRTDN 120 EIKNYWNTHL SKKLISQGID PKTHKPLLET TCTAAAATKN PKLKSVVAAK DGKNSDSDIS 180 GSSKIVTTTT PTSSGQNPNP YRHRHSGSVM DDGLEEDQMV VGHGGYGNNA HEADGAGHHY 240 FHQSDLDLED GVGGGYHVNL QLSPQGLSNE DVHHHGGGDG MINCEGMVEE DDGVLTSFLD 300 SLINDDMFV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 1e-71 | MYB family protein |