PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0039s0073.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 523aa MW: 57478.3 Da PI: 8.9417

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0039s0073.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.6	4.8e-05	63	83	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cgk F r nL+ H r H Kaladp0039s0073.1.p 63 CEICGKGFQRDQNLQLHRRGH 83 *******************88 PP
2	zf-C2H2	13.3	0.00025	137	159	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ Kaladp0039s0073.1.p 137 WKCEKCSKRYAVQSDWKAHSKTC 159 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence
MSTEEVISSS FIQTPIDGST ATISNPPAST IKKKRSLPGT PDPEAEVIAL SPRTLMATNR 60 FLCEICGKGF QRDQNLQLHR RGHNLPWKLK QRSSKEPKKR VYVCPEKTCV HHLPSRALGD 120 LTGIKKHFCR KHGEKKWKCE KCSKRYAVQS DWKAHSKTCG TREYKCDCGT LFSRRDSFIT 180 HRAFCDALAE ESARVSASNF SNNNGSAAIS SNMCNNNYHF MGTNSMLQTT MGQHHQFNSI 240 FKPMISSSNN ENEESIIYPM RRSSGLSLWN MHQGSALMAQ LGHHQVNNSI LQDQTGLFNP 300 IISSCHTSSP HPQSSVEYPF NWPFGGAKLS PTNNTSGNHE IKNSTMQPLK ELNSTEPQHV 360 VSVPSLYSNQ HQIHQTSNTS TNMSATALLQ KAAQIGATST TDPSVSILSS FSLKPTPHSN 420 NNICQLVQDG NKFCGFFSSP PSSGSVPASV THIVGTNCSD MDHNDVSNSL NHNSQMYPSK 480 RRHIAVQNNE DQNAAAGGGQ TRDFLGVGAQ TLCHPSTMNG WI*

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence

MSTEEVISSS FIQTPIDGST ATISNPPAST IKKKRSLPGT PDPEAEVIAL SPRTLMATNR  60
FLCEICGKGF QRDQNLQLHR RGHNLPWKLK QRSSKEPKKR VYVCPEKTCV HHLPSRALGD  120
LTGIKKHFCR KHGEKKWKCE KCSKRYAVQS DWKAHSKTCG TREYKCDCGT LFSRRDSFIT  180
HRAFCDALAE ESARVSASNF SNNNGSAAIS SNMCNNNYHF MGTNSMLQTT MGQHHQFNSI  240
FKPMISSSNN ENEESIIYPM RRSSGLSLWN MHQGSALMAQ LGHHQVNNSI LQDQTGLFNP  300
IISSCHTSSP HPQSSVEYPF NWPFGGAKLS PTNNTSGNHE IKNSTMQPLK ELNSTEPQHV  360
VSVPSLYSNQ HQIHQTSNTS TNMSATALLQ KAAQIGATST TDPSVSILSS FSLKPTPHSN  420
NNICQLVQDG NKFCGFFSSP PSSGSVPASV THIVGTNCSD MDHNDVSNSL NHNSQMYPSK  480
RRHIAVQNNE DQNAAAGGGQ TRDFLGVGAQ TLCHPSTMNG WI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-137	C2H2 family protein