PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0039s0023.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 392aa MW: 43945.4 Da PI: 7.7199

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0039s0023.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.8	5.3e-18	68	115	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l ++++ +G+g+W+t ++ g+ R++k+c++rw +yl Kaladp0039s0023.1.p 68 KGPWTPEEDQKLTHYIQIHGPGNWRTLPKNAGLERCGKSCRLRWTNYL 115 79********************************************97 PP
2	Myb_DNA-binding	53.1	7.5e-17	121	165	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia +++ gRt++++k++w+++ Kaladp0039s0023.1.p 121 RGRFSFEEEEAIIQLHSVLGNK-WSAIATRLP-GRTDNEIKNYWNTH 165 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MQPFNPSRVY IDTNTKLLFQ AQTASPSSYF LHNGSDLNSA INNLQTYCCK EIIMGRAPCC 60 EKSNGLKKGP WTPEEDQKLT HYIQIHGPGN WRTLPKNAGL ERCGKSCRLR WTNYLRPDIK 120 RGRFSFEEEE AIIQLHSVLG NKWSAIATRL PGRTDNEIKN YWNTHIRKRL LRSGIDPVTH 180 TPRIDLFREL TTLLKLNHPA LCNQNALLNL SNLLSLNQQT VNPQLVNIAT SLLTLKQPQE 240 STAFLQPNIF QNPNMAQFQQ FPSYPSTVNY AQQLMQGGDI NTNIPGAVDI SSKVGSFKSS 300 PMSSQDTGSP LDLEGHFGSG LMSNNYGCQP NLSSNSSFQS SLDNSNQQKQ YSLDSILSTP 360 NNQSTEEERD AYCSNLFNFE IPEGLDMSYL L*

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MQPFNPSRVY IDTNTKLLFQ AQTASPSSYF LHNGSDLNSA INNLQTYCCK EIIMGRAPCC  60
EKSNGLKKGP WTPEEDQKLT HYIQIHGPGN WRTLPKNAGL ERCGKSCRLR WTNYLRPDIK  120
RGRFSFEEEE AIIQLHSVLG NKWSAIATRL PGRTDNEIKN YWNTHIRKRL LRSGIDPVTH  180
TPRIDLFREL TTLLKLNHPA LCNQNALLNL SNLLSLNQQT VNPQLVNIAT SLLTLKQPQE  240
STAFLQPNIF QNPNMAQFQQ FPSYPSTVNY AQQLMQGGDI NTNIPGAVDI SSKVGSFKSS  300
PMSSQDTGSP LDLEGHFGSG LMSNNYGCQP NLSSNSSFQS SLDNSNQQKQ YSLDSILSTP  360
NNQSTEEERD AYCSNLFNFE IPEGLDMSYL L*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	7e-88	MYB family protein