PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0038s0084.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | DBB | ||||||||
Protein Properties | Length: 277aa MW: 29602.5 Da PI: 7.8659 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 19 | 2.9e-06 | 4 | 44 | 5 | 40 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg.....Htvv 40 C+ +e e++l C ++ lC+ C +++H + H++v Kaladp0038s0084.3.p 4 LCSACELAEAELICCADEAVLCRGCDEKIHVNklaqmHQRV 44 7******99*********************77788888865 PP | |||||||
2 | zf-B_box | 25.7 | 2.3e-08 | 51 | 92 | 2 | 37 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + +kC+ ++e +fC +++ llC+ C + Hk H Kaladp0038s0084.3.p 51 SSPKCDICQEAVGYFFCAEDRALLCQGCDASVHKMndsvsaH 92 5689*******9*********************645555555 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 277 aa Download sequence |
MKVLCSACEL AEAELICCAD EAVLCRGCDE KIHVNKLAQM HQRVYLSAPS SSPKCDICQE 60 AVGYFFCAED RALLCQGCDA SVHKMNDSVS AHQRFLLPGV RVGAHSAQLS ASSAAGFAER 120 SNLGTEISKP ITKPVSKSAG KASGGSRARR TAEAGAYSAG NGSSSPWLPN ELFSLTSVSH 180 GIYHKAHAHR PTKTGGEKLA DLELDEILGQ VGQFPESSWM VPEIPNPRPA LGICWPENHN 240 DQAAFVPEIL SSFSSKFKNH QAQQSGPLTA KRRRLS* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 271 | 275 | KRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G78600.1 | 2e-43 | DBB family protein |