PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0038s0084.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

DBB

Protein Properties

Length: 277aa MW: 29602.5 Da PI: 7.8659

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0038s0084.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19	2.9e-06	4	44	5	40
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg.....Htvv 40 C+ +e e++l C ++ lC+ C +++H + H++v Kaladp0038s0084.1.p 4 LCSACELAEAELICCADEAVLCRGCDEKIHVNklaqmHQRV 44 7****99*******************77788888865 PP
2	zf-B_box	25.7	2.3e-08	51	92	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + +kC+ ++e +fC +++ llC+ C + Hk H Kaladp0038s0084.1.p 51 SSPKCDICQEAVGYFFCAEDRALLCQGCDASVHKMndsvsaH 92 5689*****9*******************645555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MKVLCSACEL AEAELICCAD EAVLCRGCDE KIHVNKLAQM HQRVYLSAPS SSPKCDICQE 60 AVGYFFCAED RALLCQGCDA SVHKMNDSVS AHQRFLLPGV RVGAHSAQLS ASSAAGFAER 120 SNLGTEISKP ITKPVSKSAG KASGGSRARR TAEAGAYSAG NGSSSPWLPN ELFSLTSVSH 180 GIYHKAHAHR PTKTGGEKLA DLELDEILGQ VGQFPESSWM VPEIPNPRPA LGICWPENHN 240 DQAAFVPEIL SSFSSKFKNH QAQQSGPLTA KRRRLS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	271	275	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	2e-43	DBB family protein