PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0037s0533.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 682aa MW: 77336.7 Da PI: 7.0117

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0037s0533.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	38.5	3.1e-12	159	214	2	60
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkr 60 W+++ev aL+++r++ e++ We+vs+k+++ gf+rs+k+Ckek+e+ +k Kaladp0037s0533.1.p 159 WSNEEVVALLRIRSSSETSWFPP---DFTWEHVSRKLAAIGFKRSAKTCKEKFEEESKT 214 ************999887655...699***********************98875 PP
2	trihelix	88.4	8e-28	560	655	1	86
trihelix 1 rWtkqevlaLiearr.........emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcp 80 rW++++vlaLi++r + e++ +++++ +plWe++s+km + g++rs+k+Ckekwen+nk+++k+k+++ ++ +s++s+tcp Kaladp0037s0533.1.p 560 RWPRDQVLALIDLRCslltnkngdNEERDEGNKQQTAPLWERISRKMFQLGYQRSAKRCKEKWENINKYFRKTKDNNVNKkRSNDSRTCP 649 8***********9666665543333333345699************************************9888579*** PP trihelix 81 yfdqle 86 yf+ql Kaladp0037s0533.1.p 650 YFHQLS 655 **96 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MFDGMHNQDQ LFHQFISFSS PSSSRPPPLP SSLHHQQLSS PFPASFPVAS PPPIIPPPPP 60 NQSIQFSDLF HRPTNLPSFH HLNPAPSPHN LISSKQYTSD QHTNSNSISD VLEAQVHPKD 120 EVGLIRSLFP RAAASSSTLL VERERPSSSP PTLHQHEFWS NEEVVALLRI RSSSETSWFP 180 PDFTWEHVSR KLAAIGFKRS AKTCKEKFEE ESKTCFDTFN NRVISDRNSY RIFSELENIC 240 GRDDNNAEKS AIQLQANDRE EDPIIKINNH QDMQAEEEEG LECENKQANT RCNNNVLEED 300 ADAGVSPAMI IQQYSQREQL ECREKVMKAK AKKKKKIRQE HKFQIMKGLC EGLVNKMMTQ 360 QEELHNKILE DLLKRDEENK AREEAWKRME VERLNTELEI RAQEQAIAGD RQAAIIDLLS 420 TTTTSATSHE SRRGIIDANI VAHLLKPIPH MSTKVITQSH DQNPPPPDQP PCPNLQTLIV 480 HEALEPPQTP TSTIEPHISN PPACLPASYS TTPVDSSGGR SAPAQLICYP KPSTKKAIMQ 540 QPNNNSGAGI LSEEDQHGVR WPRDQVLALI DLRCSLLTNK NGDNEERDEG NKQQTAPLWE 600 RISRKMFQLG YQRSAKRCKE KWENINKYFR KTKDNNVNKK RSNDSRTCPY FHQLSQLYEQ 660 GTLTAPSHHH TPLLENGQNK M*

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MFDGMHNQDQ LFHQFISFSS PSSSRPPPLP SSLHHQQLSS PFPASFPVAS PPPIIPPPPP  60
NQSIQFSDLF HRPTNLPSFH HLNPAPSPHN LISSKQYTSD QHTNSNSISD VLEAQVHPKD  120
EVGLIRSLFP RAAASSSTLL VERERPSSSP PTLHQHEFWS NEEVVALLRI RSSSETSWFP  180
PDFTWEHVSR KLAAIGFKRS AKTCKEKFEE ESKTCFDTFN NRVISDRNSY RIFSELENIC  240
GRDDNNAEKS AIQLQANDRE EDPIIKINNH QDMQAEEEEG LECENKQANT RCNNNVLEED  300
ADAGVSPAMI IQQYSQREQL ECREKVMKAK AKKKKKIRQE HKFQIMKGLC EGLVNKMMTQ  360
QEELHNKILE DLLKRDEENK AREEAWKRME VERLNTELEI RAQEQAIAGD RQAAIIDLLS  420
TTTTSATSHE SRRGIIDANI VAHLLKPIPH MSTKVITQSH DQNPPPPDQP PCPNLQTLIV  480
HEALEPPQTP TSTIEPHISN PPACLPASYS TTPVDSSGGR SAPAQLICYP KPSTKKAIMQ  540
QPNNNSGAGI LSEEDQHGVR WPRDQVLALI DLRCSLLTNK NGDNEERDEG NKQQTAPLWE  600
RISRKMFQLG YQRSAKRCKE KWENINKYFR KTKDNNVNKK RSNDSRTCPY FHQLSQLYEQ  660
GTLTAPSHHH TPLLENGQNK M*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28300.1	3e-76	Trihelix family protein