PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0037s0482.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 335aa MW: 37459.4 Da PI: 6.5077 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.2 | 6.9e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed +l ++++++G g+W+t ++ g+ R++k+c++rw +yl Kaladp0037s0482.1.p 14 KGPWTADEDVKLREYIERHGAGNWRTLPQNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55 | 1.9e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ +lG++ W++Ia++++ gRt++++k++w+++ Kaladp0037s0482.1.p 67 RGRFSFEEEEAIIQLHSLLGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 335 aa Download sequence |
MGRAPASSSS GLKKGPWTAD EDVKLREYIE RHGAGNWRTL PQNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEEAIIQ LHSLLGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG 120 LDPVTHAPRL HHLPHSTSHL NDNLANLLFF LNQQQQMVNP QLLNIATTLL ALNQQPNQTL 180 FNDNSTHVSE DEKFDAYAPQ IHDHQFQPYN SSSFLQSNNQ HAGGFSTSSS TGMDDLSAHE 240 SWYGFSSSNV GGCSQMLLPP LVHDEKAAAT SSSFGSLNNN QQQQQLSTYT AATPFTSYTS 300 SPLDSSYTSN GFSTEDDIDS ILNFEIPDLT ELLY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 8e-83 | MYB family protein |