PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0037s0405.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 329aa    MW: 37056.2 Da    PI: 6.5543
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0037s0405.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.36.4e-171461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+WT+eEd  lv +++++G+g+W++++   g+ R+ k+c++rw +yl
  Kaladp0037s0405.1.p 14 KGPWTPEEDIVLVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYL 61
                         79******************************99************97 PP
2Myb_DNA-binding43.76.5e-1467112148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg++T  E+  ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
  Kaladp0037s0405.1.p  67 RGNFTSHEEGMIIHLQALLGNK-WAAIASYLP-ERTDNDIKNYWNTHL 112
                          89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MGRPPCCDKD GVKKGPWTPE EDIVLVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY  60
LRPGIKRGNF TSHEEGMIIH LQALLGNKWA AIASYLPERT DNDIKNYWNT HLKKKLDNRY  120
QQTMEQPHHH YLINSSQQLH HPSNNMGAAS SSTSSSNNGV ITCVHNNDSP SPLLHATTNS  180
SSLTSSSHYA SSTENISRLL EGWMRTSPKT NNKQLIIRSS RSEHESSCED LIVVGMEEDE  240
AVVVPNKDDD TAGHEMTMWG KGRNECFDKE MMMMMMKQQL DEEGGNDSSH GHQRHNNPPF  300
SIFEKWLFEE TSNSGGGQVE EMQLSPIF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.11e-86MYB family protein