PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0037s0141.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 286aa    MW: 32638.5 Da    PI: 7.0429
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0037s0141.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding271.1e-082670345
                         SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
      Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                          W+ eE +l+  a + + ++   +W+++a++++ g++  ++++ + 
  Kaladp0037s0141.1.p 26 YWSREENKLFESALAIYDKNtadRWEKVAQMIP-GKSVSDVINQYK 70
                         5********************************.*********997 PP
2Myb_DNA-binding40.65.8e-13126170347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          +WT++E+ +++ +  ++G g+W++I+r +   +t+ q+ s+ qky
  Kaladp0037s0141.1.p 126 PWTEDEHRRFLMGLLKHGRGDWRSISRNFVGSKTPTQVASHAQKY 170
                          8****************************999************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MIMETVYQTF QLQDSNWLPQ KSHGSYWSRE ENKLFESALA IYDKNTADRW EKVAQMIPGK  60
SVSDVINQYK ELEDDVSYIE AGLVPTPGYL TSSFTLELGD DRDFDALRKK SARARSADHE  120
KRKGVPWTED EHRRFLMGLL KHGRGDWRSI SRNFVGSKTP TQVASHAQKY FLRLNSGMRD  180
KRRPSIHDIT TTNITNPPPS DDFRVAAFDQ FLMLPPPDKE ASDNVVLDWN QHQNASAAAL  240
EPDNGNLFVP PAPYENLYAT AYHGLQVRPH NPMFEVQSAR QRIRG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.14e-74MYB family protein