PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0037s0134.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 439aa MW: 46999.1 Da PI: 5.7774

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0037s0134.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.2	7.7e-18	73	118	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l+ +v+++G ++W++Iar ++ gR++k+c++rw + Kaladp0037s0134.1.p 73 KGPWSPEEDAILKGLVNKFGARNWSLIARGVP-GRSGKSCRLRWCNQ 118 79****************************.*********985 PP
2	Myb_DNA-binding	52.6	1.1e-16	125	169	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd +++ ++ +G++ W++Ia+ m+ gRt++ +k++w++ Kaladp0037s0134.1.p 125 RKPFTDEEDRFIIESHAIHGNK-WAAIAKLMP-GRTDNAIKNHWNST 169 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MPNYHEPMAN EDEPPTIHAV SGTPVVPHHD APPICGGCED AEAVAAFESG GGGDSSGEDG 60 GSGGGGDGGN RVKGPWSPEE DAILKGLVNK FGARNWSLIA RGVPGRSGKS CRLRWCNQLD 120 PGVKRKPFTD EEDRFIIESH AIHGNKWAAI AKLMPGRTDN AIKNHWNSTL RRRITGVPRN 180 KPIPSGTVYP HFSANATRML LDHSLDGNKA SSEETLSNGD TNPVRQQNAG AMSLTDLTPD 240 LHSEENSQVN EVHHHSIAEE HPSIPRPVAR ISAFSIYNST PNPSLGSPFS RTGMMQDPKM 300 DFGIFKDLDD ICSDPMIPSQ CGFGCCASPN NGHSHRSLLG PEFVEYIEEP SFSSHELISI 360 ATDLNSIAWI KSGLENSGGK TAENETGPSV SPFTAPQIGL TTHPLNISYR QFVEGPSALA 420 GMMQQALSTQ GLWQTNSS*

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MPNYHEPMAN EDEPPTIHAV SGTPVVPHHD APPICGGCED AEAVAAFESG GGGDSSGEDG  60
GSGGGGDGGN RVKGPWSPEE DAILKGLVNK FGARNWSLIA RGVPGRSGKS CRLRWCNQLD  120
PGVKRKPFTD EEDRFIIESH AIHGNKWAAI AKLMPGRTDN AIKNHWNSTL RRRITGVPRN  180
KPIPSGTVYP HFSANATRML LDHSLDGNKA SSEETLSNGD TNPVRQQNAG AMSLTDLTPD  240
LHSEENSQVN EVHHHSIAEE HPSIPRPVAR ISAFSIYNST PNPSLGSPFS RTGMMQDPKM  300
DFGIFKDLDD ICSDPMIPSQ CGFGCCASPN NGHSHRSLLG PEFVEYIEEP SFSSHELISI  360
ATDLNSIAWI KSGLENSGGK TAENETGPSV SPFTAPQIGL TTHPLNISYR QFVEGPSALA  420
GMMQQALSTQ GLWQTNSS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	2e-90	MYB family protein