PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0037s0048.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 316aa    MW: 35483.1 Da    PI: 8.2134
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0037s0048.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.22.1e-141462148
                         TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                         +g+W +eEd  l  +++ +G+g +W + ++++g++R++k+c++rw++yl
  Kaladp0037s0048.1.p 14 KGPWAPEEDAMLRAYIHAHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62
                         79*********************************************97 PP
2Myb_DNA-binding37.55.5e-1270111346
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                           ++ eEd ++  +    G++ W+ Ia+ ++ gRt++++k++w++
  Kaladp0037s0048.1.p  70 GFSDEEDNIICSLYISIGSR-WSVIAAQLP-GRTDNDIKNYWNT 111
                          699*****************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MGRAPCCDKN LVKKGPWAPE EDAMLRAYIH AHGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSDEEDNIIC SLYISIGSRW SVIAAQLPGR TDNDIKNYWN TKLKKKLLGR  120
RKQSDSMVSS SSSTAVDTRD GMSDATQRLS NSALERLQLH IQLQNGPLNG PTTLWPKLLH  180
PAQERMIQNL NVDYTRRQQK LPLNEPAGMH DNGLPEMETA KSGNPKFDEF KISDDRVDSV  240
MEQLVSSPSW QLQAEFDTFM RREDGNELPV WWSSDMENKS SASVSSNSWD GSNSVMGSMG  300
GNLMMFHEYG LGYNM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.11e-84MYB family protein