PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0036s0319.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Protein Properties

Length: 672aa MW: 73023.2 Da PI: 7.0427

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0036s0319.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	61.9	1.1e-19	324	423	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+kvl+ sd+++ grlvlpk +ae++ +++ e++ ++++d +g++W++++++ +++s++yvl+ G ++ +L++gD+v+F++ Kaladp0036s0319.1.p 324 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGTPIRIQDAKGKEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVIFSR-- 410 99************************556667788***********99899999999.*******************4.. PP S.SEE..EEEEE- CS B3 87 r.sefelvvkvfr 98 r +++lv++ ++ Kaladp0036s0319.1.p 411 RdPGGKLVIGSRK 423 4499999998776 PP

Sequence ? help Back to Top
Protein Sequence Length: 672 aa Download sequence
MGTAICMNKS CRTPSSPEWK SGWPLRSGGF ATLCLVCGSA FENLVYCETF HRDESGWREC 60 DSCKKPIHCG CASSKPFIEL LDLGGACCIT CAKTTGQPIW RDEVSNGHST QVLSSVGGLQ 120 PTLGEVRIKG DIAGKGKNLL LGKTKMGGDP DCLPEIPKGE ANFSLGAVNG EDVMQSFGDL 180 SSNFLNLNSQ SVGSSHPNVS LGIQDSYEAI PQTSLNIGLS ASSDPSNFSA KNSCGVVEGI 240 ELIKLPSPLQ QSQRSRVILP KLSKGGLSLS IDASKAVVQQ PRVARPPAEG RGRNQLLPRY 300 WPRITDQELQ QLSGDLNSPV VPLFEKVLSA SDAGRIGRLV LPKACAEAYF PPISQSEGTP 360 IRIQDAKGKE WTFQFRFWPN NNSRMYVLEG VTPCIQSMQL QAGDTVIFSR RDPGGKLVIG 420 SRKASVSSDT PDGDIAALAN GAHGESSFSG VSAASGYSGI LQSAAENRDP RMLALSEQMT 480 LAHCNLGWSK SDRYRGRIIG TTLQPSMVNR PKNISLKSRR LLMHNEDVLE LKLTWDEAQD 540 LLRAPPSIKP SIVTVEDHEI EEFDEPPVLA KKTIFTVGPS GGQEQWAQCD LCSKWRRLPV 600 DVLLPLKWNC AENFWDSDRC LCSAPDEVGA KELENLLKSG KGMTETCVIM RLLYVVVIDS 660 LQNRCYYELI K*

Sequence ? help Back to Top

Protein Sequence Length: 672 aa Download sequence

MGTAICMNKS CRTPSSPEWK SGWPLRSGGF ATLCLVCGSA FENLVYCETF HRDESGWREC  60
DSCKKPIHCG CASSKPFIEL LDLGGACCIT CAKTTGQPIW RDEVSNGHST QVLSSVGGLQ  120
PTLGEVRIKG DIAGKGKNLL LGKTKMGGDP DCLPEIPKGE ANFSLGAVNG EDVMQSFGDL  180
SSNFLNLNSQ SVGSSHPNVS LGIQDSYEAI PQTSLNIGLS ASSDPSNFSA KNSCGVVEGI  240
ELIKLPSPLQ QSQRSRVILP KLSKGGLSLS IDASKAVVQQ PRVARPPAEG RGRNQLLPRY  300
WPRITDQELQ QLSGDLNSPV VPLFEKVLSA SDAGRIGRLV LPKACAEAYF PPISQSEGTP  360
IRIQDAKGKE WTFQFRFWPN NNSRMYVLEG VTPCIQSMQL QAGDTVIFSR RDPGGKLVIG  420
SRKASVSSDT PDGDIAALAN GAHGESSFSG VSAASGYSGI LQSAAENRDP RMLALSEQMT  480
LAHCNLGWSK SDRYRGRIIG TTLQPSMVNR PKNISLKSRR LLMHNEDVLE LKLTWDEAQD  540
LLRAPPSIKP SIVTVEDHEI EEFDEPPVLA KKTIFTVGPS GGQEQWAQCD LCSKWRRLPV  600
DVLLPLKWNC AENFWDSDRC LCSAPDEVGA KELENLLKSG KGMTETCVIM RLLYVVVIDS  660
LQNRCYYELI K*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	1e-177	B3 family protein