PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0036s0172.4.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 609aa MW: 66088.3 Da PI: 9.5627

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0036s0172.4.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.2e-05	82	104	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H Kaladp0036s0172.4.p 82 FICEVCNKGFQREQNLQLHRRGH 104 89*******************88 PP
2	zf-C2H2	12.4	0.00047	158	180	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ Kaladp0036s0172.4.p 158 WKCDKCSKRYAVQSDWKAHSKTC 180 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 609 aa Download sequence
MAELRNMAAS HSSSLSFFGA SQDDHQQMMS NQQILQQQNS SAPPQQAATT PQKKRRNLPG 60 NPNPDAEVIA LSPKTLMATN RFICEVCNKG FQREQNLQLH RRGHNLPWKL KQKSTKEVKR 120 KVYLCPEPTC VHHDPSRALG DLTGIKKHFS RKHGEKKWKC DKCSKRYAVQ SDWKAHSKTC 180 GTREYRCDCG TLFSRRDSFI THRAFCDALA QESSRHPSGL STIGSHLYGT PDQMNLSLNS 240 QLPSAASMLQ PGTNTTRTPK FEHMNHISSY GGQQYPPQTV SSSGFFINDN PSSQGFHQDQ 300 SQHGISANKQ PLFHGLMQIS DHGQGNNSPT ALSNMFNLGY YAGNNATATN NNGFSSAANI 360 NMAMPESLMR SEDHQVNNVA LGPSNFSSMY NTSTNSLQQA DNMGLAPHMS ATALLQKAAQ 420 MGSTTSANNS SLLRGFASST KSSDRSHPVG TTTTNLVSGN SARGVGENLQ SSSSIMDSGN 480 NHLQSLMNSL ANESSSVFKD GVHGQSGSFM SRMLTGSNNS GDHVHHQKNN MASNNNFGKG 540 IMSSENEHKL TLDFLGVGGM VRSSMSGGFS QRSGEMHQSV VEFNPLGDTD QLKPPAPANL 600 SYAGGKLH*

Sequence ? help Back to Top

Protein Sequence Length: 609 aa Download sequence

MAELRNMAAS HSSSLSFFGA SQDDHQQMMS NQQILQQQNS SAPPQQAATT PQKKRRNLPG  60
NPNPDAEVIA LSPKTLMATN RFICEVCNKG FQREQNLQLH RRGHNLPWKL KQKSTKEVKR  120
KVYLCPEPTC VHHDPSRALG DLTGIKKHFS RKHGEKKWKC DKCSKRYAVQ SDWKAHSKTC  180
GTREYRCDCG TLFSRRDSFI THRAFCDALA QESSRHPSGL STIGSHLYGT PDQMNLSLNS  240
QLPSAASMLQ PGTNTTRTPK FEHMNHISSY GGQQYPPQTV SSSGFFINDN PSSQGFHQDQ  300
SQHGISANKQ PLFHGLMQIS DHGQGNNSPT ALSNMFNLGY YAGNNATATN NNGFSSAANI  360
NMAMPESLMR SEDHQVNNVA LGPSNFSSMY NTSTNSLQQA DNMGLAPHMS ATALLQKAAQ  420
MGSTTSANNS SLLRGFASST KSSDRSHPVG TTTTNLVSGN SARGVGENLQ SSSSIMDSGN  480
NHLQSLMNSL ANESSSVFKD GVHGQSGSFM SRMLTGSNNS GDHVHHQKNN MASNNNFGKG  540
IMSSENEHKL TLDFLGVGGM VRSSMSGGFS QRSGEMHQSV VEFNPLGDTD QLKPPAPANL  600
SYAGGKLH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02080.1	1e-126	C2H2 family protein