PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0036s0172.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 610aa MW: 66202.4 Da PI: 9.4535

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0036s0172.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.2e-05	83	105	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H Kaladp0036s0172.3.p 83 FICEVCNKGFQREQNLQLHRRGH 105 89*******************88 PP
2	zf-C2H2	12.4	0.00047	159	181	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ Kaladp0036s0172.3.p 159 WKCDKCSKRYAVQSDWKAHSKTC 181 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 610 aa Download sequence
MAELRNMAAS HSSSLSFFGA SQDDHQQMMS NQQILQQQNS SAPPQQAATT PQKKRRNLPG 60 NPIDPDAEVI ALSPKTLMAT NRFICEVCNK GFQREQNLQL HRRGHNLPWK LKQKSTKEVK 120 RKVYLCPEPT CVHHDPSRAL GDLTGIKKHF SRKHGEKKWK CDKCSKRYAV QSDWKAHSKT 180 CGTREYRCDC GTLFSRRDSF ITHRAFCDAL AQESSRHPSG LSTIGSHLYG TPDQMNLSLN 240 SQLPSAASML QPGTNTTRTP KFEHMNHISS YGGQQYPPQT VSSSGFFIND NPSSQGFHQD 300 QSQHGISANK QPLFHGLMQI SDHGQGNNSP TALSNMFNLG YYAGNNATAT NNNGFSSAAN 360 INMAMPESLM RSEDHQVNNV ALGPSNFSSM YNTSTNSLQQ ADNMGLAPHM SATALLQKAA 420 QMGSTTSANN SSLLRGFASS TKSSDRSHPV GTTTTNLVSG NSARGVGENL QSSSSIMDSG 480 NNHLQSLMNS LANESSSVFK DGVHGQSGSF MSRMLTGSNN SGDHVHHQKN NMASNNNFGK 540 GIMSSENEHK LTLDFLGVGG MVRSSMSGGF SQRSGEMHQS VVEFNPLGDT DQLKPPAPAN 600 LSYAGGKLH*

Sequence ? help Back to Top

Protein Sequence Length: 610 aa Download sequence

MAELRNMAAS HSSSLSFFGA SQDDHQQMMS NQQILQQQNS SAPPQQAATT PQKKRRNLPG  60
NPIDPDAEVI ALSPKTLMAT NRFICEVCNK GFQREQNLQL HRRGHNLPWK LKQKSTKEVK  120
RKVYLCPEPT CVHHDPSRAL GDLTGIKKHF SRKHGEKKWK CDKCSKRYAV QSDWKAHSKT  180
CGTREYRCDC GTLFSRRDSF ITHRAFCDAL AQESSRHPSG LSTIGSHLYG TPDQMNLSLN  240
SQLPSAASML QPGTNTTRTP KFEHMNHISS YGGQQYPPQT VSSSGFFIND NPSSQGFHQD  300
QSQHGISANK QPLFHGLMQI SDHGQGNNSP TALSNMFNLG YYAGNNATAT NNNGFSSAAN  360
INMAMPESLM RSEDHQVNNV ALGPSNFSSM YNTSTNSLQQ ADNMGLAPHM SATALLQKAA  420
QMGSTTSANN SSLLRGFASS TKSSDRSHPV GTTTTNLVSG NSARGVGENL QSSSSIMDSG  480
NNHLQSLMNS LANESSSVFK DGVHGQSGSF MSRMLTGSNN SGDHVHHQKN NMASNNNFGK  540
GIMSSENEHK LTLDFLGVGG MVRSSMSGGF SQRSGEMHQS VVEFNPLGDT DQLKPPAPAN  600
LSYAGGKLH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02080.1	1e-124	C2H2 family protein