PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0036s0172.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 632aa MW: 68765.5 Da PI: 9.5707

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0036s0172.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.3e-05	105	127	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H Kaladp0036s0172.2.p 105 FICEVCNKGFQREQNLQLHRRGH 127 89*******************88 PP
2	zf-C2H2	12.4	0.00049	181	203	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ Kaladp0036s0172.2.p 181 WKCDKCSKRYAVQSDWKAHSKTC 203 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 632 aa Download sequence
MLQFPTTILL DSICRIISSR IHHMAELRNM AASHSSSLSF FGASQDDHQQ MMSNQQILQQ 60 QNSSAPPQQA ATTPQKKRRN LPGNPNPDAE VIALSPKTLM ATNRFICEVC NKGFQREQNL 120 QLHRRGHNLP WKLKQKSTKE VKRKVYLCPE PTCVHHDPSR ALGDLTGIKK HFSRKHGEKK 180 WKCDKCSKRY AVQSDWKAHS KTCGTREYRC DCGTLFSRRD SFITHRAFCD ALAQESSRHP 240 SGLSTIGSHL YGTPDQMNLS LNSQLPSAAS MLQPGTNTTR TPKFEHMNHI SSYGGQQYPP 300 QTVSSSGFFI NDNPSSQGFH QDQSQHGISA NKQPLFHGLM QISDHGQGNN SPTALSNMFN 360 LGYYAGNNAT ATNNNGFSSA ANINMAMPES LMRSEDHQVN NVALGPSNFS SMYNTSTNSL 420 QQADNMGLAP HMSATALLQK AAQMGSTTSA NNSSLLRGFA SSTKSSDRSH PVGTTTTNLV 480 SGNSARGVGE NLQSSSSIMD SGNNHLQSLM NSLANESSSV FKDGVHGQSG SFMSRMLTGS 540 NNSGDHVHHQ KNNMASNNNF GKGIMSSENE HKLTLDFLGV GGMVRSSMSG GFSQRSGEMH 600 QSVVEFNPLG DTDQLKPPAP ANLSYAGGKL H*

Sequence ? help Back to Top

Protein Sequence Length: 632 aa Download sequence

MLQFPTTILL DSICRIISSR IHHMAELRNM AASHSSSLSF FGASQDDHQQ MMSNQQILQQ  60
QNSSAPPQQA ATTPQKKRRN LPGNPNPDAE VIALSPKTLM ATNRFICEVC NKGFQREQNL  120
QLHRRGHNLP WKLKQKSTKE VKRKVYLCPE PTCVHHDPSR ALGDLTGIKK HFSRKHGEKK  180
WKCDKCSKRY AVQSDWKAHS KTCGTREYRC DCGTLFSRRD SFITHRAFCD ALAQESSRHP  240
SGLSTIGSHL YGTPDQMNLS LNSQLPSAAS MLQPGTNTTR TPKFEHMNHI SSYGGQQYPP  300
QTVSSSGFFI NDNPSSQGFH QDQSQHGISA NKQPLFHGLM QISDHGQGNN SPTALSNMFN  360
LGYYAGNNAT ATNNNGFSSA ANINMAMPES LMRSEDHQVN NVALGPSNFS SMYNTSTNSL  420
QQADNMGLAP HMSATALLQK AAQMGSTTSA NNSSLLRGFA SSTKSSDRSH PVGTTTTNLV  480
SGNSARGVGE NLQSSSSIMD SGNNHLQSLM NSLANESSSV FKDGVHGQSG SFMSRMLTGS  540
NNSGDHVHHQ KNNMASNNNF GKGIMSSENE HKLTLDFLGV GGMVRSSMSG GFSQRSGEMH  600
QSVVEFNPLG DTDQLKPPAP ANLSYAGGKL H*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02080.1	1e-126	C2H2 family protein