PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0036s0172.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 633aa MW: 68879.6 Da PI: 9.4647

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0036s0172.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.3e-05	106	128	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H Kaladp0036s0172.1.p 106 FICEVCNKGFQREQNLQLHRRGH 128 89*******************88 PP
2	zf-C2H2	12.4	0.00049	182	204	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ Kaladp0036s0172.1.p 182 WKCDKCSKRYAVQSDWKAHSKTC 204 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 633 aa Download sequence
MLQFPTTILL DSICRIISSR IHHMAELRNM AASHSSSLSF FGASQDDHQQ MMSNQQILQQ 60 QNSSAPPQQA ATTPQKKRRN LPGNPIDPDA EVIALSPKTL MATNRFICEV CNKGFQREQN 120 LQLHRRGHNL PWKLKQKSTK EVKRKVYLCP EPTCVHHDPS RALGDLTGIK KHFSRKHGEK 180 KWKCDKCSKR YAVQSDWKAH SKTCGTREYR CDCGTLFSRR DSFITHRAFC DALAQESSRH 240 PSGLSTIGSH LYGTPDQMNL SLNSQLPSAA SMLQPGTNTT RTPKFEHMNH ISSYGGQQYP 300 PQTVSSSGFF INDNPSSQGF HQDQSQHGIS ANKQPLFHGL MQISDHGQGN NSPTALSNMF 360 NLGYYAGNNA TATNNNGFSS AANINMAMPE SLMRSEDHQV NNVALGPSNF SSMYNTSTNS 420 LQQADNMGLA PHMSATALLQ KAAQMGSTTS ANNSSLLRGF ASSTKSSDRS HPVGTTTTNL 480 VSGNSARGVG ENLQSSSSIM DSGNNHLQSL MNSLANESSS VFKDGVHGQS GSFMSRMLTG 540 SNNSGDHVHH QKNNMASNNN FGKGIMSSEN EHKLTLDFLG VGGMVRSSMS GGFSQRSGEM 600 HQSVVEFNPL GDTDQLKPPA PANLSYAGGK LH*

Sequence ? help Back to Top

Protein Sequence Length: 633 aa Download sequence

MLQFPTTILL DSICRIISSR IHHMAELRNM AASHSSSLSF FGASQDDHQQ MMSNQQILQQ  60
QNSSAPPQQA ATTPQKKRRN LPGNPIDPDA EVIALSPKTL MATNRFICEV CNKGFQREQN  120
LQLHRRGHNL PWKLKQKSTK EVKRKVYLCP EPTCVHHDPS RALGDLTGIK KHFSRKHGEK  180
KWKCDKCSKR YAVQSDWKAH SKTCGTREYR CDCGTLFSRR DSFITHRAFC DALAQESSRH  240
PSGLSTIGSH LYGTPDQMNL SLNSQLPSAA SMLQPGTNTT RTPKFEHMNH ISSYGGQQYP  300
PQTVSSSGFF INDNPSSQGF HQDQSQHGIS ANKQPLFHGL MQISDHGQGN NSPTALSNMF  360
NLGYYAGNNA TATNNNGFSS AANINMAMPE SLMRSEDHQV NNVALGPSNF SSMYNTSTNS  420
LQQADNMGLA PHMSATALLQ KAAQMGSTTS ANNSSLLRGF ASSTKSSDRS HPVGTTTTNL  480
VSGNSARGVG ENLQSSSSIM DSGNNHLQSL MNSLANESSS VFKDGVHGQS GSFMSRMLTG  540
SNNSGDHVHH QKNNMASNNN FGKGIMSSEN EHKLTLDFLG VGGMVRSSMS GGFSQRSGEM  600
HQSVVEFNPL GDTDQLKPPA PANLSYAGGK LH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02080.1	1e-123	C2H2 family protein