PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0036s0051.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 231aa MW: 26486.3 Da PI: 9.5951 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.5 | 2e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtf+kRrng++KKA+ELSvLCdaeva+++fs++g+lyeys+ Kaladp0036s0051.3.p 9 KRIENVTSRQVTFCKRRNGLMKKAYELSVLCDAEVALMVFSTRGRLYEYSN 59 79***********************************************95 PP | |||||||
2 | K-box | 106.6 | 3e-35 | 79 | 174 | 5 | 100 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 + +++ ++ + +qqe+akL+++i+++q+++R+l+Ge+L+sL++keL+qLe++Le+++++iRskK+e+ll++ie lqk+e el++e+ +L Kaladp0036s0051.3.p 79 TAANTTVTNVQFYQQESAKLRQQIHMIQNTNRNLMGESLGSLNVKELKQLENRLERGVTRIRSKKHEMLLAEIEFLQKREIELENETICL 168 455578899********************************************************************************* PP K-box 95 rkklee 100 r+k++e Kaladp0036s0051.3.p 169 RAKVAE 174 ***986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MGRGKIEIKR IENVTSRQVT FCKRRNGLMK KAYELSVLCD AEVALMVFST RGRLYEYSNN 60 NSIKSTIERY KKACSDSTTA ANTTVTNVQF YQQESAKLRQ QIHMIQNTNR NLMGESLGSL 120 NVKELKQLEN RLERGVTRIR SKKHEMLLAE IEFLQKREIE LENETICLRA KVAEVERLQQ 180 ANMEAANQEL NTIQAYVARN FFQHDLLQGA DNASQVNHFA LPDDKILRLG * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09960.1 | 1e-107 | MIKC_MADS family protein |