PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0035s0085.7.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 439aa MW: 48798.5 Da PI: 5.7721

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0035s0085.7.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.1	4.8e-11	255	298	6	54
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 n+ Er+RR + +++ L++llP++ K++ a+i+ +A++YIk+L Kaladp0035s0085.7.p 255 NATERKRRVEFSGKYDALKSLLPSP-----NKPDRASIVGEAIDYIKEL 298 99********************8.....6**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MAASKDTSSF DATSVPEEGL HVANMMASST TNSFEENMKF PGEEFSHSSH KLGFGIMDNH 60 YYASNSSADN LMQEVLCDSN QDPAGDQMSW NAHGVNEMQN GHRGFHVPNL QDHPYPATHE 120 LLDLFNLPRC SASSFVPNSL ISFSNPVHKV SNFNSSLGFL GDHTQPENMP ASANLYDPLY 180 QMSPPPQQPS IRELIQSTLP RCCNFSGLNG SLYGGEDERD VVGGAYQDLE GRDFDSEVLE 240 FTGEKPRKGK GKEGNATERK RRVEFSGKYD ALKSLLPSPN KPDRASIVGE AIDYIKELKR 300 TVSELKSLVE KKKCGKERNK KPKTEEDGFG DYNGSLRCSW LQRKSKDAEV DVRIIDDEVT 360 IKLVQRKRIN CLLLVTKILD ELQLDLQHVA GGHAGDFYSF LFNTKIYEGS YVYATGIANR 420 LLEAVERQYA AVPPSSKY*

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MAASKDTSSF DATSVPEEGL HVANMMASST TNSFEENMKF PGEEFSHSSH KLGFGIMDNH  60
YYASNSSADN LMQEVLCDSN QDPAGDQMSW NAHGVNEMQN GHRGFHVPNL QDHPYPATHE  120
LLDLFNLPRC SASSFVPNSL ISFSNPVHKV SNFNSSLGFL GDHTQPENMP ASANLYDPLY  180
QMSPPPQQPS IRELIQSTLP RCCNFSGLNG SLYGGEDERD VVGGAYQDLE GRDFDSEVLE  240
FTGEKPRKGK GKEGNATERK RRVEFSGKYD ALKSLLPSPN KPDRASIVGE AIDYIKELKR  300
TVSELKSLVE KKKCGKERNK KPKTEEDGFG DYNGSLRCSW LQRKSKDAEV DVRIIDDEVT  360
IKLVQRKRIN CLLLVTKILD ELQLDLQHVA GGHAGDFYSF LFNTKIYEGS YVYATGIANR  420
LLEAVERQYA AVPPSSKY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	4e-76	bHLH family protein