PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0034s0174.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 422aa MW: 46908 Da PI: 6.8691

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0034s0174.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.7	9.6e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++ +G g+W+++++ g+ R++k+c++rw +yl Kaladp0034s0174.1.p 14 KGLWSPEEDEKLLRHITNYGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	47.2	5.3e-15	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++++eE+ ++v++++ lG++ W+ Ia+ ++ gRt++++k+ w++ Kaladp0034s0174.1.p 67 RGAFSQEEENIIVELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT NYGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGAF SQEEENIIVE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG 120 VDPNTHRPIS EMEAAEQERS ATEVAAISLQ ASHENNNKLS AAGSDEAISM HLIDPSSDSL 180 KMKPNSVSID NYHSSYEANS KFSHNMTQDF FLDRCETSKV TSGQPDMLGG YLSFIAPSSL 240 SSTQASTVPF NFCSRPSGSS SIPDQQFSNN NSVPSIFPSI SNSMFLSNTS RARAPDSAIS 300 DTNQSMGSYD WDQRQNGTNA CSYPWEMEAN KSIGHLEEAK WSEYLLQNTT SSFGTLPSGG 360 NSNLFNGCEM IKPEPAHNGS SSGASLLWHH QMNQQQQQHS SQAEVYAKDL QTLTMAFEQT 420 F*

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT NYGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGAF SQEEENIIVE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG  120
VDPNTHRPIS EMEAAEQERS ATEVAAISLQ ASHENNNKLS AAGSDEAISM HLIDPSSDSL  180
KMKPNSVSID NYHSSYEANS KFSHNMTQDF FLDRCETSKV TSGQPDMLGG YLSFIAPSSL  240
SSTQASTVPF NFCSRPSGSS SIPDQQFSNN NSVPSIFPSI SNSMFLSNTS RARAPDSAIS  300
DTNQSMGSYD WDQRQNGTNA CSYPWEMEAN KSIGHLEEAK WSEYLLQNTT SSFGTLPSGG  360
NSNLFNGCEM IKPEPAHNGS SSGASLLWHH QMNQQQQQHS SQAEVYAKDL QTLTMAFEQT  420
F*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	118	LKKKLRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	2e-90	MYB family protein