PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0034s0160.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 185aa MW: 19458.1 Da PI: 5.6925 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.6 | 7.6e-19 | 38 | 88 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr+p + r +r +lg+f t eeAa a++ a+ kl+g Kaladp0034s0160.1.p 38 CIYRGVRQRT-WGKWVAEIREP---N-RgARLWLGTFNTSEEAATAYDSAAIKLYG 88 56*****999.**********8...3.35************************987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 185 aa Download sequence |
MNVDDDNPPT PAAAAKPQTG RSRKGCARGK GGPENASCIY RGVRQRTWGK WVAEIREPNR 60 GARLWLGTFN TSEEAATAYD SAAIKLYGSA AKLNLLTLHQ HQHENNTNAA TTTTTIGTAS 120 SSSGSNSNSI SSGNYNNGEL GFGETTTAMG GFPGGGGGGE ESGDEFLYVN DFKDWDGMQV 180 PWSF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G18450.1 | 3e-41 | ERF family protein |