PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0034s0127.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Trihelix | ||||||||
Protein Properties | Length: 343aa MW: 39118.8 Da PI: 7.0059 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 42.6 | 1.6e-13 | 234 | 305 | 1 | 71 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkr 71 +W+++e+ +L+ea ++ +l+r++l+ +W+e ++k+ ++ + rs ++C++k++ l+kry+k+k+ ++++ Kaladp0034s0127.1.p 234 EWSEHETFLLLEAWGDRYLQLGRKSLRSDDWKELAEKVsEASEIDRSDVECRNKMDTLKKRYRKEKAKMEQN 305 5*************************************667889**********************999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 343 aa Download sequence |
MYLKSCYEEA QHQTAHSSLL ASPAHLLLLL PPSIFTPETR SSLPNPKIKI SFLFPPKFRS 60 KHTPDLKLQF SLFLNFPLHP SSLDLFFRSL ILMDDSEQNT RYPQMRFPVT SRHQPTYGSQ 120 SSRSLVPVRN QTHLRPVNFT RFKEDYGEDE VDDDEDSYEI EETGYGGMNG GRADFSRGGL 180 EEEEYGNGNR IEFGGGLERN SKKRKMKSVM DYEDGGSANG GGSRELGARN GIREWSEHET 240 FLLLEAWGDR YLQLGRKSLR SDDWKELAEK VSEASEIDRS DVECRNKMDT LKKRYRKEKA 300 KMEQNYTDSM KGAFSRPVCW PSVEAKCAGN YGSPHVNLKN IC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24490.1 | 3e-24 | Trihelix family protein |