PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0033s0140.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | YABBY | ||||||||
Protein Properties | Length: 227aa MW: 25651.1 Da PI: 8.8264 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 216.8 | 6.8e-67 | 20 | 208 | 3 | 170 |
YABBY 3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas.qllaaeshldeslkee....................l 71 + sss+q+Cyv+CnfC+t+lavsvPs slfk+vtvrCGhC++llsvn+ +++++h + ++++ Kaladp0033s0140.1.p 20 HSSSSHQLCYVHCNFCDTVLAVSVPSCSLFKTVTVRCGHCSNLLSVNMGALLvPPQPSSNHQYHPIHNPppslhqeelyvvntvmnnsaA 109 57899****************************************999876634566777655555554799999999888887766663 PP YABBY 72 leelkveeenlksnvekeesastsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWa 161 +e ++ +e++ + + ++ + ++ ++ e+l++ ++++++ +++PPekrqrvPs ynrfi+eeiqrika+nPdi+hr+afsaaaknWa Kaladp0033s0140.1.p 110 AESEQEREQEHHRKPTMMQIQQPKRVDEMLNTFSKQKTSLFASINKPPEKRQRVPSVYNRFIREEIQRIKAGNPDITHRQAFSAAAKNWA 199 3333333333333333333344444445668888888888899*********************************************** PP YABBY 162 hfPkihfgl 170 +fP+ihfgl Kaladp0033s0140.1.p 200 YFPHIHFGL 208 *******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MSSSSTSSFS PPDHHQTLVH SSSSHQLCYV HCNFCDTVLA VSVPSCSLFK TVTVRCGHCS 60 NLLSVNMGAL LVPPQPSSNH QYHPIHNPPP SLHQEELYVV NTVMNNSAAA ESEQEREQEH 120 HRKPTMMQIQ QPKRVDEMLN TFSKQKTSLF ASINKPPEKR QRVPSVYNRF IREEIQRIKA 180 GNPDITHRQA FSAAAKNWAY FPHIHFGLMP EELHQPVTKK PNLLSR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00180.1 | 1e-58 | YABBY family protein |