PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0033s0101.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family YABBY
Protein Properties Length: 204aa    MW: 22814.1 Da    PI: 8.9495
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0033s0101.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY222.31.4e-68101716170
                YABBY   6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesasts 95 
                           +eq+Cy+ CnfCn +lavsvP +slf +vtvrCGhCt+l svn+a a q   + ++l++  + +++ +  + +++++  +  ++s+ t+
  Kaladp0033s0101.3.p  10 GPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSALSWQDLHHYHQLTQAPNYLNGGQDCRIDNLGSSSKITN 99 
                          589********************************************9999999999999999999999999999999999888888887 PP

                YABBY  96 vsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                          +++++++ ++  e      v+rPPek+qrvPsayn+fikeeiqrika+nPdishreafs+aaknWahfP+ihfgl
  Kaladp0033s0101.3.p 100 KTMMRVPAQKPTEE---RVVNRPPEKKQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGL 171
                          77766554444333...469*****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MGSSCVDVVG PEQLCYIPCN FCNIVLAVSV PCSSLFDIVT VRCGHCTNLW SVNMAAAFQS  60
ALSWQDLHHY HQLTQAPNYL NGGQDCRIDN LGSSSKITNK TMMRVPAQKP TEERVVNRPP  120
EKKQRVPSAY NQFIKEEIQR IKANNPDISH REAFSTAAKN WAHFPHIHFG LMLETNNNNQ  180
PTRFDQNIAG KRLMSKAAGL MKK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.13e-83YABBY family protein