PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0032s0357.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 310aa MW: 35128.8 Da PI: 4.8797

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0032s0357.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.2	0.00055	204	226	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C k+Fs+ L H +H Kaladp0032s0357.1.p 204 YKCETCLKTFSSYQALGGHRASH 226 9************9999998887 PP
2	zf-C2H2	13.4	0.00023	249	271	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C+++F++ L H r+H Kaladp0032s0357.1.p 249 HQCPVCHRVFPSGQALGGHKRSH 271 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MERHRCKLCW RRFGSGRALG GHMRSHVMNP SMYSDTQQPD HFDAEEEEEE EEGEEVNDGS 60 LVSHQDRESE SEASRRILTR RRSKRLRPAS ALQSGFGCRE KKLKCQVNRG SEPAWSELVE 120 QGSSVSDSSV EDVAFCLMML SRDKWNNNDP EVEEEEKHEE EEEVRAAAES EEEEEDTEDD 180 EDDSTKLQEK MGHQKKLALA KEKYKCETCL KTFSSYQALG GHRASHNKIK LVPNPSSLAD 240 PKIPDRRIHQ CPVCHRVFPS GQALGGHKRS HALMVPEVIQ QERAPIRCGD VVIDLNFPAP 300 ADEDDVEAF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	104	RRRSKRLRPASALQSGFGCREKKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	4e-41	C2H2 family protein