PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0032s0035.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 468aa MW: 51348.2 Da PI: 9.564

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0032s0035.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.8	2.2e-06	249	271	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +CpdCg++F +nL++H+ + H Kaladp0032s0035.1.p 249 SCPDCGEVFMKADNLETHQAVrH 271 8******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MANSTNSHHP DQPKIHQNKS KGQQQSKPEP KLEQKPNSPP LIISKRDLLK IPSTTTSKPA 60 PSWNVIRSIL SCKHIQTQGP QPQPQTPLQP QKLKQKQQHH IEPGESSNSS SSSEPKRFKK 120 MKCSGSICSN TKVIQRSDLL SSVGSSFHTI SSISETSNNA GSSSSSRSMK PPPTPRKEHG 180 HHHATNQSSN STPIPSSSSY HHNNNAGSGS GLKGIPLLRF TGCYECRMVV DPVVLGFTRD 240 PSLGSTVCSC PDCGEVFMKA DNLETHQAVR HAVSELGPED TSRNIVEIIF QSSWFKKQTP 300 VCKIDRILKV NNTPKKISNF ESYRESIKFK ANKTVKKHPR CIADGNELLR FHCTTLLCSL 360 GLNGSTNLCN SIPTCSVCSV IRNGFKLTEK GIWTTATSGK ADDKIEASSE KRAMLVCRVI 420 AGRVRRGNSE EFDSVSEGLE TYSSLDELYV FNQMAIMPCF VVIYGES*

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MANSTNSHHP DQPKIHQNKS KGQQQSKPEP KLEQKPNSPP LIISKRDLLK IPSTTTSKPA  60
PSWNVIRSIL SCKHIQTQGP QPQPQTPLQP QKLKQKQQHH IEPGESSNSS SSSEPKRFKK  120
MKCSGSICSN TKVIQRSDLL SSVGSSFHTI SSISETSNNA GSSSSSRSMK PPPTPRKEHG  180
HHHATNQSSN STPIPSSSSY HHNNNAGSGS GLKGIPLLRF TGCYECRMVV DPVVLGFTRD  240
PSLGSTVCSC PDCGEVFMKA DNLETHQAVR HAVSELGPED TSRNIVEIIF QSSWFKKQTP  300
VCKIDRILKV NNTPKKISNF ESYRESIKFK ANKTVKKHPR CIADGNELLR FHCTTLLCSL  360
GLNGSTNLCN SIPTCSVCSV IRNGFKLTEK GIWTTATSGK ADDKIEASSE KRAMLVCRVI  420
AGRVRRGNSE EFDSVSEGLE TYSSLDELYV FNQMAIMPCF VVIYGES*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-89	C2H2 family protein