PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0031s0072.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 339aa    MW: 38195.9 Da    PI: 7.3262
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0031s0072.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding574.3e-181562148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+WT+eEd++l ++++ +G+g+W+t ++  g+ R++k+c++rw +yl
  Kaladp0031s0072.1.p 15 KGPWTPEEDQKLTHYIQIHGPGNWRTLPKNAGLERCGKSCRLRWTNYL 62
                         79********************************************97 PP
2Myb_DNA-binding53.65.2e-1768112147
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          rgr++ eE+e +++++  lG++ W++Ia++++ gRt++++k++w+++
  Kaladp0031s0072.1.p  68 RGRFSFEEEEAIIQLHSVLGNK-WSAIAARLP-GRTDNEIKNYWNTH 112
                          89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MGRAPCCEKS NGLKKGPWTP EEDQKLTHYI QIHGPGNWRT LPKNAGLERC GKSCRLRWTN  60
YLRPDIKRGR FSFEEEEAII QLHSVLGNKW SAIAARLPGR TDNEIKNYWN THIRKRLLRN  120
GIDPVTHAPR IDLIHELTTL LKLNNPALCN QNALLNLSNL LSLNQQIVNP QLLNLATSLL  180
TLKQPQQSLD FLTHNTFQMQ NPNIAQFQQF QLCPSSVNHA QQLMQGGDYN TSNPGAIDMI  240
SKVESFKSSP VSSHDTESPS NVGDHFGSGL MYNYGSEPNL SSHWSFQSLN NCSQHKQYSL  300
DSTVSTPNNG STEEERDTYC SNLFNFEIPE GLDMSYLL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.14e-88MYB family protein