PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0031s0049.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 454aa MW: 50188.8 Da PI: 7.0386

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0031s0049.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.6	2.6e-17	30	77	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +l+d+v+++G g+W+++ r g+ R++k+c++rw ++l Kaladp0031s0049.1.p 30 KGPWTSAEDAILIDYVRKHGEGNWNAVQRNSGLQRCGKSCRLRWANHL 77 79******************************************9986 PP
2	Myb_DNA-binding	50.2	5.8e-16	83	126	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T++E+ l++++++++G++ W++ a+ m+ gRt++++k++w++ Kaladp0031s0049.1.p 83 KGAFTPDEERLILELHAKFGNK-WARMAAQMQ-GRTDNEIKNYWNT 126 799*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MMASSSSHGE TTTTRSSGGG AAEEVVALKK GPWTSAEDAI LIDYVRKHGE GNWNAVQRNS 60 GLQRCGKSCR LRWANHLRPD LKKGAFTPDE ERLILELHAK FGNKWARMAA QMQGRTDNEI 120 KNYWNTRMKR HQRAGLAIYP THIQSGHRQH RLQRHRKQQQ HAMKSTTSHT QMLDFQNQTA 180 INFNNPSSQS QPFLFTTHQV PIPSHHHQFN FFTEQKNAND QQSCDQTSLS SAAASHSLFL 240 ANPLHQALEL KNNEPDSSAG IIGSSDFGLV HLSGSHMSSM QSVGCDDHRL SKANVSSGML 300 DDVYLNAVEL GNEKDDSSNQ RLLLMPASKK MKDCGVTTPE NSNSGLTSIG MRVEEPAVVE 360 MNPLDDDELT SLLYSFPSAS PTPQWYRRGT TNNDNDSSGD AYGGVVLDLI HRPAMTLPDH 420 LMPPDPAANG QDLSLEGSPT STLMLWHNLP TIY*

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MMASSSSHGE TTTTRSSGGG AAEEVVALKK GPWTSAEDAI LIDYVRKHGE GNWNAVQRNS  60
GLQRCGKSCR LRWANHLRPD LKKGAFTPDE ERLILELHAK FGNKWARMAA QMQGRTDNEI  120
KNYWNTRMKR HQRAGLAIYP THIQSGHRQH RLQRHRKQQQ HAMKSTTSHT QMLDFQNQTA  180
INFNNPSSQS QPFLFTTHQV PIPSHHHQFN FFTEQKNAND QQSCDQTSLS SAAASHSLFL  240
ANPLHQALEL KNNEPDSSAG IIGSSDFGLV HLSGSHMSSM QSVGCDDHRL SKANVSSGML  300
DDVYLNAVEL GNEKDDSSNQ RLLLMPASKK MKDCGVTTPE NSNSGLTSIG MRVEEPAVVE  360
MNPLDDDELT SLLYSFPSAS PTPQWYRRGT TNNDNDSSGD AYGGVVLDLI HRPAMTLPDH  420
LMPPDPAANG QDLSLEGSPT STLMLWHNLP TIY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.1	4e-69	MYB family protein