PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0031s0041.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 451aa MW: 48979.7 Da PI: 6.5114

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0031s0041.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.4	2e-30	204	262	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gC+v+k+v+r+aed +++++tYeg+Hnh+ Kaladp0031s0041.2.p 204 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCTVRKQVQRCAEDRTILITTYEGNHNHP 262 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MVDDGSSPAT DDTRAKNEIV MLRAEIERVD RENQELKEML SHVTKSYSTM QVHLMTLMEE 60 SQKKDAHAQQ QLHVKHRQED KQQIEVGTSR LVQKQLVVDL GLVPASDIHD QQSLSSSENN 120 EDGRSNSPPT NSEVASRLQM EEEAEITRRE ISMGMGREEE AVHVSPNKVP RFNPSKTNNA 180 DQAEATMRKA RVSVRARSEA TMITDGCQWR KYGQKMAKGN PCPRAYYRCT MAAGCTVRKQ 240 VQRCAEDRTI LITTYEGNHN HPLPPAAMAM ASTTSSAAHM LLSGSMSSTD GLMNPNFLAR 300 TLLPCSSNMA TISASAPFPT VTLDLTQDPN AATQPPPNTI QSQFQNPSQN LALLPQLFTQ 360 TLYNQSMFSG LQMSQHRDSS LGPKQQGPLA DSVTAAAIAA DPNFTAVIAA AISSMIGNSH 420 PINNITTNSS NSNGNNSGAN IVSSSGIPEN *

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MVDDGSSPAT DDTRAKNEIV MLRAEIERVD RENQELKEML SHVTKSYSTM QVHLMTLMEE  60
SQKKDAHAQQ QLHVKHRQED KQQIEVGTSR LVQKQLVVDL GLVPASDIHD QQSLSSSENN  120
EDGRSNSPPT NSEVASRLQM EEEAEITRRE ISMGMGREEE AVHVSPNKVP RFNPSKTNNA  180
DQAEATMRKA RVSVRARSEA TMITDGCQWR KYGQKMAKGN PCPRAYYRCT MAAGCTVRKQ  240
VQRCAEDRTI LITTYEGNHN HPLPPAAMAM ASTTSSAAHM LLSGSMSSTD GLMNPNFLAR  300
TLLPCSSNMA TISASAPFPT VTLDLTQDPN AATQPPPNTI QSQFQNPSQN LALLPQLFTQ  360
TLYNQSMFSG LQMSQHRDSS LGPKQQGPLA DSVTAAAIAA DPNFTAVIAA AISSMIGNSH  420
PINNITTNSS NSNGNNSGAN IVSSSGIPEN *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-106	WRKY family protein